Arabidopsis thaliana (thale cress): AT2G29400
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Entry
AT2G29400 CDS
T00041
Symbol
TOPP1
Name
(RefSeq) type one protein phosphatase 1
KO
K06269
serine/threonine-protein phosphatase PP1 catalytic subunit [EC:
3.1.3.16
]
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath03015
mRNA surveillance pathway
ath04156
Integrated stress response (ISR) signaling pathway
ath04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
AT2G29400 (TOPP1)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
AT2G29400 (TOPP1)
09140 Cellular Processes
09143 Cell growth and death
04156 Integrated stress response (ISR) signaling pathway
AT2G29400 (TOPP1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ath01009
]
AT2G29400 (TOPP1)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ath03021
]
AT2G29400 (TOPP1)
03019 Messenger RNA biogenesis [BR:
ath03019
]
AT2G29400 (TOPP1)
03041 Spliceosome [BR:
ath03041
]
AT2G29400 (TOPP1)
Enzymes [BR:
ath01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
AT2G29400 (TOPP1)
Protein phosphatases and associated proteins [BR:
ath01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
Catalytic subunits
AT2G29400 (TOPP1)
Transcription machinery [BR:
ath03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
AT2G29400 (TOPP1)
Messenger RNA biogenesis [BR:
ath03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
AT2G29400 (TOPP1)
Spliceosome [BR:
ath03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
AT2G29400 (TOPP1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Metallophos
STPPase_N
Motif
Other DBs
NCBI-GeneID:
817489
NCBI-ProteinID:
NP_180501
TAIR:
AT2G29400
UniProt:
P30366
LinkDB
All DBs
Position
2:complement(12613014..12615414)
Genome browser
AA seq
318 aa
AA seq
DB search
MAEKPAQEQEQKRAMEPAVLDDIIRRLVEFRNTRPGSGKQVHLSEGEIRQLCAVSKEIFL
QQPNLLELEAPIKICGDIHGQYSDLLRLFEYGGFPPEANYLFLGDYVDRGKQSLETICLL
LAYKIKYPENFFLLRGNHESASINRIYGFYDECKRRFNVRLWKIFTDCFNCLPVAALIDD
RILCMHGGISPELKSLDQIRNIARPMDIPESGLVCDLLWSDPSGDVGWGMNDRGVSYTFG
ADKVAEFLEKHDMDLICRAHQVVEDGYEFFAERQLVTVFSAPNYCGEFDNAGAMMSIDES
LMCSFQILKPSEKKSPFL
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atggcggagaagccggcgcaagagcaagagcagaagcgagcgatggaacctgcagttctc
gacgatattattcgtcgtttggttgagtttcggaacacgagacctggatcggggaagcaa
gttcatctcagtgaaggtgaaattcgtcagctttgtgctgtctccaaagaaatatttctt
caacagcccaatctgcttgaattggaagctcccatcaagatctgcggtgatattcatggg
cagtattcagatctattgaggctttttgagtatggagggttccctcccgaagctaattat
ttgttcttgggtgattatgttgaccgtggcaagcaaagcttggaaacaatatgtcttctt
ctagcttacaaaatcaagtaccctgagaacttcttcttgttgagagggaatcatgaatct
gcttccattaatcgtatttacggtttctatgatgagtgcaaacgcaggttcaatgtcaga
ctctggaaaatattcaccgattgctttaactgtcttcctgtggccgccttaattgatgac
agaatactatgtatgcatggtgggatttccccagagctgaaaagtttggaccagattaga
aatattgcacggccgatggatattccggagtctggtttggtatgtgatttactatggtcg
gatcctagtggagacgtaggctggggcatgaatgatcgtggtgtttcatacacttttgga
gctgacaaagtcgcagagttcttggagaaacatgacatggaccttatctgtcgtgcccac
caggttgttgaagatgggtatgagttctttgcagaaagacaacttgttacagtattttca
gctcccaactattgcggggaatttgacaacgctggcgcaatgatgagcattgatgagagc
ttaatgtgctcattccagattctaaagccgtcagaaaagaagtcgccttttctgtga
DBGET
integrated database retrieval system