KEGG   Arabidopsis thaliana (thale cress): AT2G29400
Entry
AT2G29400         CDS       T00041                                 
Symbol
TOPP1
Name
(RefSeq) type one protein phosphatase 1
  KO
K06269  serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
Organism
ath  Arabidopsis thaliana (thale cress)
Pathway
ath03015  mRNA surveillance pathway
ath04156  Integrated stress response (ISR) signaling pathway
ath04519  Cadherin signaling
Brite
KEGG Orthology (KO) [BR:ath00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    AT2G29400 (TOPP1)
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04519 Cadherin signaling
    AT2G29400 (TOPP1)
 09140 Cellular Processes
  09143 Cell growth and death
   04156 Integrated stress response (ISR) signaling pathway
    AT2G29400 (TOPP1)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:ath01009]
    AT2G29400 (TOPP1)
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ath03021]
    AT2G29400 (TOPP1)
   03019 Messenger RNA biogenesis [BR:ath03019]
    AT2G29400 (TOPP1)
   03041 Spliceosome [BR:ath03041]
    AT2G29400 (TOPP1)
Enzymes [BR:ath01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.3  Phosphoric-monoester hydrolases
    3.1.3.16  protein-serine/threonine phosphatase
     AT2G29400 (TOPP1)
Protein phosphatases and associated proteins [BR:ath01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    Catalytic subunits
     AT2G29400 (TOPP1)
Transcription machinery [BR:ath03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     AT2G29400 (TOPP1)
Messenger RNA biogenesis [BR:ath03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     AT2G29400 (TOPP1)
Spliceosome [BR:ath03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   Other SAPs
    AT2G29400 (TOPP1)
SSDB
Motif
Pfam: Metallophos STPPase_N
Other DBs
NCBI-GeneID: 817489
NCBI-ProteinID: NP_180501
TAIR: AT2G29400
UniProt: P30366
LinkDB
Position
2:complement(12613014..12615414)
AA seq 318 aa
MAEKPAQEQEQKRAMEPAVLDDIIRRLVEFRNTRPGSGKQVHLSEGEIRQLCAVSKEIFL
QQPNLLELEAPIKICGDIHGQYSDLLRLFEYGGFPPEANYLFLGDYVDRGKQSLETICLL
LAYKIKYPENFFLLRGNHESASINRIYGFYDECKRRFNVRLWKIFTDCFNCLPVAALIDD
RILCMHGGISPELKSLDQIRNIARPMDIPESGLVCDLLWSDPSGDVGWGMNDRGVSYTFG
ADKVAEFLEKHDMDLICRAHQVVEDGYEFFAERQLVTVFSAPNYCGEFDNAGAMMSIDES
LMCSFQILKPSEKKSPFL
NT seq 957 nt   +upstreamnt  +downstreamnt
atggcggagaagccggcgcaagagcaagagcagaagcgagcgatggaacctgcagttctc
gacgatattattcgtcgtttggttgagtttcggaacacgagacctggatcggggaagcaa
gttcatctcagtgaaggtgaaattcgtcagctttgtgctgtctccaaagaaatatttctt
caacagcccaatctgcttgaattggaagctcccatcaagatctgcggtgatattcatggg
cagtattcagatctattgaggctttttgagtatggagggttccctcccgaagctaattat
ttgttcttgggtgattatgttgaccgtggcaagcaaagcttggaaacaatatgtcttctt
ctagcttacaaaatcaagtaccctgagaacttcttcttgttgagagggaatcatgaatct
gcttccattaatcgtatttacggtttctatgatgagtgcaaacgcaggttcaatgtcaga
ctctggaaaatattcaccgattgctttaactgtcttcctgtggccgccttaattgatgac
agaatactatgtatgcatggtgggatttccccagagctgaaaagtttggaccagattaga
aatattgcacggccgatggatattccggagtctggtttggtatgtgatttactatggtcg
gatcctagtggagacgtaggctggggcatgaatgatcgtggtgtttcatacacttttgga
gctgacaaagtcgcagagttcttggagaaacatgacatggaccttatctgtcgtgcccac
caggttgttgaagatgggtatgagttctttgcagaaagacaacttgttacagtattttca
gctcccaactattgcggggaatttgacaacgctggcgcaatgatgagcattgatgagagc
ttaatgtgctcattccagattctaaagccgtcagaaaagaagtcgccttttctgtga

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