Arabidopsis thaliana (thale cress): AT2G32070
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Entry
AT2G32070 CDS
T00041
Name
(RefSeq) Polynucleotidyl transferase, ribonuclease H-like superfamily protein
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AT2G32070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ath03019
]
AT2G32070
Messenger RNA biogenesis [BR:
ath03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
AT2G32070
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
AT2G32070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
817767
NCBI-ProteinID:
NP_565735
TAIR:
AT2G32070
UniProt:
Q9SKZ2
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Position
2:complement(13640594..13642060)
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AA seq
275 aa
AA seq
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MSLFLKDDSIQIREVWNDNLESEMALIREVVDDFPFVAMDTEFPGIVCRPVGTFKTNTEY
HYETLKTNVNILKMIQLGLTFSDEKGNLPTCGTDNKYCIWQFNFREFDLESDIYATDSIE
LLRQSGIDFVKNNEFGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNL
PETQTGFFEMISVYFPRVYDIKHLMKFCNSLHGGLNKLAELLDVERVGICHQAGSDSLLT
SCTFRKLQENFFIGSMEKYSGVLYGLGVENGQIVH
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgtcactgtttctaaaagacgattcgattcaaatccgtgaagtatggaacgacaatctc
gaatcagagatggctctgattcgagaagtcgtagacgatttcccattcgtagcgatggac
acagagttcccaggaatcgtgtgtagaccagtgggaacattcaaaaccaacacagagtac
cactacgaaactctcaaaacaaacgtcaacatactcaagatgattcagcttggactcact
ttctctgatgagaaaggtaacctcccaacttgtggaacagacaacaagtattgcatctgg
cagttcaatttccgcgaattcgacctcgaatccgatatctacgctaccgattcgatcgag
cttcttcgtcaatcaggcatcgatttcgtgaaaaacaacgaattcggtatcgattcgaag
cggttcgctgagcttttgatgtcttcagggattgtgttgaatgaaaacgttcattgggtt
acattccacagcggatacgatttcggttacttgttgaagctattgacttgtcagaatctt
cccgagacgcaaacagggttcttcgagatgatcagtgtgtatttcccgagggtttatgat
atcaaacacttgatgaagttctgtaatagtcttcatggaggtctgaataaattggcggag
ctgcttgatgttgagagagttgggatttgtcaccaggccggatcggatagcttgttaacg
tcgtgtacattcaggaagctgcaggagaatttcttcattggttcaatggagaagtattct
ggtgttttgtatggtttaggtgttgagaatggtcagattgttcattga
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