Arabidopsis thaliana (thale cress): AT2G35920
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Entry
AT2G35920 CDS
T00041
Name
(RefSeq) RNA helicase family protein
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AT2G35920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ath03019
]
AT2G35920
03012 Translation factors [BR:
ath03012
]
AT2G35920
Enzymes [BR:
ath01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
AT2G35920
Messenger RNA biogenesis [BR:
ath03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
AT2G35920
Translation factors [BR:
ath03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
AT2G35920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
DEAD
HA2_N
AAA_22
nSTAND3
T2SSE
Rad17
AAA_19
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
818165
NCBI-ProteinID:
NP_850255
TAIR:
AT2G35920
UniProt:
F4ILR7
A0A178VST3
LinkDB
All DBs
Position
2:15075343..15080812
Genome browser
AA seq
995 aa
AA seq
DB search
MPPHGPNSQGGRRGGGHSSGRRGGRGGGGRGGGGGGRGEQRWWDPVWRAERLRQQQAEME
VLDENEWWNKIEQWKTGGEQEMLIKRNFSRGDQQTLSDMALQMGLYFHAYNKGKALVVSK
VPLPDYRADLDERHGSTQKEIKMSTETERKLGSLLKTTQESGSSGASASAFNDQQDRTST
LGLKRPDSASKLPDSLEKEKFSFALKERQEKLKATESVKALKAFREKLPAFKMKEEFLNS
VSQNQVLVVSGETGCGKTTQLPQFILEEEISSLRGADCNIICTQPRRISAISVASRISAE
RGESIGESVGYQIRLESKRSDQTRLLFCTTGVLLRRLIEDPNLTNVSHLLVDEIHERGMN
EDFLLIILRDLLPRRPDLRLILMSATINADMFSTYFGNSPTMHIPGFTFPVAELFLEDVL
EKSRYNIKSSDSGNYQGSSRGRRRESESKKDDLTTLFEDIDINSHYKSYSSATRNSLEAW
SGAQIDVDLVEATIEHICRLEGGGAILVFLTGWDEISKLLEKINMNNFLGDSSKFLVLPL
HGSMPTVNQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKVA
CLLPSWISKASAHQRRGRAGRVQAGVCYRLYPKVIYDAFPQYQLPEIIRTPLQELCLHIK
SLQVGSIGSFLAKALQPPDALAVENAIELLKTIGALNDVEELTPLGRHLCTLPVDPNIGK
MLLIGAIFQCVNPALTIAAALAYRSPFVLPLNRKEEADEAKRYFAGDSCSDHIALLKAYE
GYRDAKRGGNEKDFCWQNFLSPVTLRMMEDMRNQFLDLLSDIGFVDKSKPNAYNQYSYDM
EMISAVLCAGLYPNVVQCKRRGKRTAFYTKELGKVDIHPGSVNARVNLFSLPYLVYSEKV
KTTSVYIRDSTNISDYALLMFGGNLIPSKTGEGIEMLGGYLHFSASKNILELIQRLRGEV
DKLLNKKIEDPSLDITVEGKGVVSAVVELLRSQKH
NT seq
2988 nt
NT seq
+upstream
nt +downstream
nt
atgcctcctcacggtcctaattctcaaggtggtcgtcgaggcggaggtcattcctccggt
cgtcgtggtggacgcggcggcggcggtcgtggcggtggtggtggcggccggggggaacag
cgatggtgggatcctgtgtggagagctgagcgtttgcgccagcaacaagctgagatggaa
gtacttgatgagaatgaatggtggaacaagattgagcaatggaaaacaggaggagaacaa
gagatgctaattaagcgtaattttagccgtggagatcagcaaacactttctgatatggct
ttgcagatgggtctttactttcatgcgtacaataaagggaaggctcttgttgttagcaaa
gttcctttaccagattatcgagcggatcttgatgaacggcatggatccactcagaaagag
attaaaatgtccacagagactgagagaaaacttggaagtcttttgaaaacaacacaagaa
tcagggtcctctggtgcctctgcttcagcttttaacgatcaacaggatcgtacttcaact
cttggcttgaaaagacctgattctgcttccaaattgccggattctcttgagaaagaaaaa
ttcagttttgcactcaaggaaaggcaggaaaagcttaaggcaactgagagtgtaaaagca
cttaaagcgttcagagaaaagctacctgcttttaaaatgaaagaggagtttcttaactct
gtttcacaaaaccaggtattggtagtttcaggagagaccgggtgtggtaaaacaacacag
cttcctcaatttatattggaagaagaaatatcatccctaagaggtgctgattgcaacata
atttgcactcaacctcgacgtatatcggccatatctgttgcttctcgtatatctgctgaa
agaggtgaatccattggtgaatctgtgggttatcagattcgtctagaatcaaagcgttct
gatcaaacacgattgctattttgcactactggtgttttactccggcggctgattgaggat
cctaatctaactaacgtaagccatttgctcgtggatgagattcacgaaagaggcatgaat
gaagattttctactaatcatactacgcgatctccttcctcgacgcccagatttgcgtctt
attctgatgagtgctacgattaacgctgacatgttctcaacatactttgggaactctccc
actatgcacatcccgggtttcacatttcctgtggcagagttattcctagaagatgtattg
gagaaaagtcgttataatattaagtcgtctgactcggggaattatcaaggtagttcgaga
ggtagaagaagagaatcagaatccaagaaagatgatctgactactctttttgaggatatt
gacatcaattctcactataaaagttatagctcggccacaagaaattctcttgaagcatgg
tctggtgcacagattgatgtggatctggtggaggcaacaattgaacatatttgtcgtctt
gaaggtggtggggcgattcttgtcttccttactggctgggatgagatttcaaaactgctt
gaaaaaattaacatgaacaactttcttggagattcgagcaagttcttagttcttccttta
catggttcaatgccgacggttaatcaacgtgaaatttttgaccgtccacctcctaacaaa
cggaaaatagttttggctacaaacattgccgagagtagtattacaattgatgatgttgta
tatgttgtggattgtggtaaagcaaaggaaactagctatgatgctttgaacaaggtggca
tgtctcttgccatcatggatatcaaaggcttcagctcaccagagacgaggtcgtgctgga
cgtgttcaagctggagtttgttataggttgtatccaaaagttatctatgatgcttttcca
cagtatcagttaccagaaatcatacggactccattacaagagctatgcctgcatatcaaa
agtttgcaagttggatctataggctcattcttggcaaaggcactgcagccaccagatgca
cttgctgttgagaatgctattgaacttctcaaaacaattggggctttaaatgacgtggaa
gagcttacaccccttggtcggcatctttgcactctacccgtggacccaaatattggaaag
atgcttctgattggagctatcttccagtgcgtcaatcctgctttgacaatcgctgctgct
ctggcgtatcgtagcccatttgtcttaccattaaataggaaagaggaagctgatgaagcc
aaacgatattttgctggtgattcctgcagtgatcacattgctcttcttaaggcatatgag
ggatatcgggatgcaaagcgtggtggaaacgaaaaagatttttgttggcaaaactttctt
tcccctgtaactctaaggatgatggaggatatgagaaaccagtttcttgatcttctatca
gatatagggtttgtagacaaatcaaagccaaatgcatacaaccaatatagctacgatatg
gagatgataagtgcggttctatgtgcggggctgtacccaaatgttgtccaatgcaaaaga
agagggaagcgcactgcgttctatactaaagagctgggtaaagttgatatccaccctgga
tctgtcaacgcaagagtgaatctcttctctttgccgtacttggtctacagcgaaaaggtg
aagacgacaagtgtttatatccgagactcgacaaatatatcagactatgcactccttatg
tttggtggcaatcttatcccaagcaaaaccggggaaggtatagagatgttgggagggtat
ctccatttctcagcctcgaagaacatcttagaactgatacagagattgaggggagaggtg
gacaagctactgaataagaagatagaggatccgagtttggacataacagtggaggggaaa
ggagtggtctcagctgtggtggagttgttacgtagccaaaaacattag
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