Arabidopsis thaliana (thale cress): AT2G36660
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Entry
AT2G36660 CDS
T00041
Symbol
PAB7
Name
(RefSeq) poly(A) binding protein 7
KO
K13126
polyadenylate-binding protein
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath03015
mRNA surveillance pathway
ath03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
AT2G36660 (PAB7)
09123 Folding, sorting and degradation
03018 RNA degradation
AT2G36660 (PAB7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ath03019
]
AT2G36660 (PAB7)
03041 Spliceosome [BR:
ath03041
]
AT2G36660 (PAB7)
Messenger RNA biogenesis [BR:
ath03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
AT2G36660 (PAB7)
mRNA cycle factors
Stress granule specific factors
AT2G36660 (PAB7)
Spliceosome [BR:
ath03041
]
Complex C
Other components
Complex C specific factors
AT2G36660 (PAB7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_7
RBD_DEAH11
RRM_Nup35
PABC_AtC3H46
Motif
Other DBs
NCBI-GeneID:
818238
NCBI-ProteinID:
NP_181204
TAIR:
AT2G36660
UniProt:
Q9ZQA8
A0A654EZI4
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Position
2:complement(15361321..15364398)
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AA seq
609 aa
AA seq
DB search
MATVHAALHAADASSSGSSSPVTASLYVGDLHPSVTEGILYDAFAEFKSLTSVRLCKDAS
SGRSLCYGYANFLSRQDANLAIEKKNNSLLNGKMIRVMWSVRAPDARRNGVGNVFVKNLP
ESVTNAVLQDMFKKFGNIVSCKVATLEDGKSRGYGFVQFEQEDAAHAAIQTLNSTIVADK
EIYVGKFMKKTDRVKPEEKYTNLYMKNLDADVSEDLLREKFAEFGKIVSLAIAKDENRLC
RGYAFVNFDNPEDARRAAETVNGTKFGSKCLYVGRAQKKAEREQLLREQFKEKHEEQKMI
AKVSNIYVKNVNVAVTEEELRKHFSQCGTITSTKLMCDEKGKSKGFGFVCFSTPEEAIDA
VKTFHGQMFHGKPLYVAIAQKKEDRKMQLQVQFGNRVEARKSSSSASVNPGTYAPLYYTN
THPGMVYQSYPLMWKSANMIGSSYPNSEAVTYPPMVANAPSKNRQNRIGKLDRNAVSYVP
NVYQSTQMLPLSRDFSKQQHSRTYGRGKEMKKSIQQRQSETVGMEMQLLGELLHPLVEKL
EPQLANKITGMLLEMDKSELLLLLKSPEDLAVRVDEAFEVLKSSKTNLTAPNTHRSDYLA
SGIAGVSIK
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atggcgactgttcatgctgcattacatgcggcggatgcttcttcttcgggatcgagttct
ccagtgacggcgtcgttatatgtcggagacttacacccttccgtcaccgaaggtatactc
tacgacgcgttcgccgagttcaagagcttaacttctgttcgtctctgtaaagacgcttcg
tctggtcgctctctctgttatggctacgctaactttctctcgcgtcaagacgctaacctt
gccattgagaaaaaaaataacagtttgttgaatggaaaaatgattcgagtaatgtggtct
gttcgagcacctgatgctaggagaaatggggttggaaatgtctttgttaagaatttgcct
gagtcagtcaccaatgcggttctgcaagatatgttcaagaaatttgggaacattgtttcc
tgtaaggttgcaactcttgaagatggaaagagtcggggatatggttttgttcaatttgag
caagaagacgctgcacatgctgctattcagaccttgaatagtaccattgttgctgacaag
gagatctatgttggaaaattcatgaaaaagactgatcgagtgaaacctgaggaaaagtac
acgaacttgtacatgaagaatctcgatgcagatgtcagtgaggatcttttaagggaaaag
tttgcagagtttgggaaaattgttagcctagcaattgcaaaagatgagaaccgattatgt
agaggatatgcatttgtcaactttgacaacccagaggatgcaagacgggcagctgaaaca
gtgaatggaacaaaatttggttcgaagtgtctatatgtaggaagggcgcaaaagaaagca
gaacgggagcaactgctaagggaacaatttaaagagaaacatgaagaacagaagatgata
gccaaggtgtcaaacatatatgtgaaaaacgtcaatgttgctgttactgaggaggagctg
agaaaacacttcagtcaatgtggcacaatcacttcgacaaagctgatgtgtgatgagaaa
ggaaaaagcaaggggtttggatttgtgtgcttctcaacacctgaagaagctattgatgct
gtgaaaacctttcatgggcaaatgtttcacgggaaaccactatatgtggctattgctcaa
aagaaagaggacagaaagatgcagttacaggttcaatttgggaaccgtgtggaagctaga
aaaagcagctcttcagcttctgtcaatccagggacatacgctccactttactacacaaac
actcatcccgggatggtatatcaatcatacccgctgatgtggaagtctgctaacatgatt
ggttcatcatacccaaactctgaagcagtcacatatcccccaatggttgctaatgcgcca
agtaagaataggcagaacagaataggaaagttggataggaatgctgtttcgtatgtgcca
aatgtgtatcagtctactcaaatgcttcctttgtcaagagatttttcgaagcagcagcat
agcagaacctatggtcgtgggaaagaaatgaagaaatcaatccaacagagacagtctgaa
acagttgggatggagatgcaattgctcggagagttgctacaccctcttgtcgagaaactg
gagccccagcttgcaaacaaaatcacagggatgcttctggaaatggacaagtcggaattg
cttcttttgctgaaatcaccagaagacttggctgttagagttgatgaagcgtttgaagtt
ctgaaatcatccaagacaaatctgaccgctccaaacactcatcgttctgattacttggcg
tctggcattgctggcgtttcgattaagtga
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