Arabidopsis thaliana (thale cress): AT2G38020 Help Entry AT2G38020         CDS       T00041                                  Symbol VCL1 Name (RefSeq) vacuoleless1 (VCL1)   KO K20180   vacuolar protein sorting-associated protein 16 Organism ath  Arabidopsis thaliana (thale cress) Pathway ath04148   Efferocytosis Brite KEGG Orthology (KO) [BR:ath00001]  09140 Cellular Processes   09141 Transport and catabolism    04148 Efferocytosis     AT2G38020 (VCL1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:ath04131]     AT2G38020 (VCL1) Membrane trafficking [BR:ath04131]  Endosome - Lysosome transport   Tethering complex    CORVET complex     AT2G38020 (VCL1)    Hops complex     AT2G38020 (VCL1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Vps16_N Vps16_C ANAPC4_WD40 WD40_WDHD1_1st Motif Other DBs NCBI-GeneID:  818380 NCBI-ProteinID:  NP_565879 TAIR:  AT2G38020 UniProt:  Q93VQ0 A0A5S9X507 LinkDB All DBs Position 2:complement(15909908..15914711) Genome browser AA seq 858 aa AA seqDB search MANVSVAAEWQLLYDRYYRKPEIYQMKWKHVDLSRNKVACASFGGPIAVIRDDSKIVQLY AESALRKLRIFNSAGILLSETVWKHPGGRLIGMSWSDDQTLICIVQDGTIYRYNIHAELI EPNMSMGQECFEQNVVECVFWGNGVVCLTEGGQLICIFDFKTMKPSKLPDVPGLAEDDLL QPICLTVREPKYTMSGIAEVLVAVGDDIFVVEEDMVQTIRFDEPSVDDSEMQNDDSGNLI GVVQKMIVSPNGKFLTLFTHDGRIVVVDMETKQIAIDYSCESALPPQQMAWCGMDSVLLY WDEDLMMVGPVGDPVHYFYDEPIILIPECDGVRILSNTNLEFLQRVPDSTESIFKIGSTS PAALLYDALDHFDRRSAKADENLRLIRSSLSEAVESCIDAAGHEFDVTRQRALLRAASYG QAFCSNFQRERVQETCRTLRVLNAVRDPAIGIPLSIQQYKLLTPVVLISRLINANCHLLA LRISEYLDMNKEVVIMHWACAKITASPSTPDSHLLEILLDKLQLCKGISYAAVATHADNC GRRKLAAMLVEHEPRSTKQVPLLLSIGEEDTALVKATESGDTDLVYLVIFHIWQKRPPLE FFAMIQGRVLARDLFVAYARCHKHEFLKDFFLSTGQIHEVAFLLWKESWDMGKNPMASKG SPLHGPRIKLIEKARNLFSQTKEHTFESKAAEEHAKLLKIQHELEASTKQAIFVDSSIND TIRTCIVLGNNRAAIKVKTEFKVSDKRWYWLKAFALATIKDWAALEKFSKEKRPPMGFRP FVEACIDADEKAEALKYIPKLSDLVERGEAYARIGMAKEAADCAAQANDGGELLERFRKT FVQNAIFDTLLMPFQGAS NT seq 2577 nt NT seq  +upstreamnt  +downstreamnt atggcaaacgtgtctgttgctgcggaatggcagcttctctatgatcgatattataggaag cctgagatataccaaatgaaatggaaacatgtagatttgagtcgtaacaaggtggcgtgt gcttcgtttggtgggccaattgcagttattcgagatgactcgaagattgtccaactatat gctgaatctgctctaagaaagctccgcatctttaactcagcaggtatacttctctctgag acggtttggaagcatcccgggggacgtctgatcggaatgtcctggtcagatgatcagaca ctaatttgcattgtccaagatggaaccatttatcgttacaacatccacgctgagctcatt gagcccaatatgtctatgggccaggagtgctttgagcagaatgtggtggagtgtgtcttc tggggaaatggtgttgtctgcttgacagaaggagggcagttgatctgtattttcgatttc aagacaatgaagccttctaagttgcctgatgtgccggggttagcagaagatgatctgctt cagccaatctgcttgactgtgagggaacctaagtacacgatgtctgggattgctgaggtg ttggtagcagttggcgatgatatttttgttgtggaggaggacatggttcaaactattagg tttgatgagcctagtgttgatgactctgagatgcagaatgatgattctgggaatttgatt ggagtggtccagaagatgattgtatcacctaatggaaaatttctaacactcttcactcat gatggccggattgttgttgttgacatggaaacaaaacaaattgctattgactactcttgt gagtcagcccttcctccgcagcaaatggcttggtgtggaatggatagtgtgctgctatat tgggatgaggatttaatgatggtgggtcctgtaggagacccagttcactatttctatgat gaacctataattcttatcccagaatgcgatggagtgagaatattatctaacacgaatctt gaatttctgcaaagagtacctgattctactgagtcaatctttaagattggaagcacatca cctgcagctttgctatatgatgctttggatcattttgacaggcgaagtgctaaggcagat gaaaatttgagattaattcgttcatcactgtcggaggctgttgaatcctgtattgatgcc gctggacatgaatttgatgtaactcgtcagagggctctgttacgagcggcaagttatgga caagctttctgcagcaattttcagcgtgaacgtgtccaagagacttgtagaacgttacgg gttttaaatgcggttcgtgatcctgctattggcatacctcttagcattcagcagtacaag ttactgacaccagtggttttgattagtcgccttattaatgctaattgtcaccttcttgct ctgcggatatctgagtacttagatatgaataaagaagtggtgataatgcattgggcatgt gcaaagataactgcttcaccatcaactccagattctcatcttcttgaaattttacttgat aagctccaactatgcaaaggaatatcgtatgctgcagtggccactcatgctgataactgt ggccgtcgaaagttagctgcaatgctagttgaacatgaaccacgctccacgaaacaggta cctcttttattaagcattggggaggaagacactgctttagtgaaagcaactgagagtggt gacactgacctggtttatctggtcatatttcatatatggcaaaagaggcctcctttggaa ttctttgcgatgatccaaggaagagttttggcacgtgatctatttgtagcttatgcacgg tgtcataagcatgaatttctgaaggatttcttcttatctacgggccagattcatgaggta gcttttcttttatggaaagaatcatgggatatggggaaaaacccaatggctagcaaagga tctccattgcacggtccgcgcataaaactaatagagaaggctagaaaccttttctcccaa acaaaggaacacactttcgagtctaaggctgctgaggaacatgcaaaactcctgaagata caacatgagctagaagctagtacgaagcaggctatctttgttgattcaagcatcaatgat actatacgcacatgtattgtcctgggtaataaccgtgctgcaataaaagtgaagacagaa ttcaaggtcagtgataaaagatggtattggcttaaagcatttgctctcgctacaatcaaa gactgggcagcgcttgaaaagttttcgaaggaaaagagaccaccaatggggtttcgtcca tttgtggaggcatgcattgatgcagatgagaaagcggaagctctaaaatacatccccaaa ctgtctgatcttgtggaaagaggcgaggcttatgctcgtattggaatggcaaaggaagcg gctgattgcgcagctcaggcaaatgatggaggagaattgcttgagagattcaggaagacg tttgtacagaatgctattttcgataccttgttaatgcctttccaaggagcctcctag

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