Arabidopsis thaliana (thale cress): AT2G38560
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Entry
AT2G38560 CDS
T00041
Symbol
TFIIS
Name
(RefSeq) transcript elongation factor IIS
KO
K03145
transcription elongation factor S-II
Organism
ath
Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ath03021
]
AT2G38560 (TFIIS)
Transcription machinery [BR:
ath03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
AT2G38560 (TFIIS)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TFIIS_M
Zn_ribbon_TFIIS
Med26
CTNNBL
Fn3_Dep-1_5th
UTP20
Motif
Other DBs
NCBI-GeneID:
818438
NCBI-ProteinID:
NP_181390
TAIR:
AT2G38560
UniProt:
Q9ZVH8
A0A178VY86
Structure
PDB
PDBj
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All DBs
Position
2:16134543..16136695
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AA seq
378 aa
AA seq
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MESDLIDLFEGAKKAADAAALDGVTSSGPEVSQCIDALKQLKKFPVTYDTLVATQVGKKL
RSLAKHPVEDIKSVATDLLEIWKKVVIEETAKAKKTEGTNGCKEAKVNKMDVEKPSNPAP
VKVQKLQRGDSAKSIKVERKEPDNKVVTGVKIERKVPDIKVTNGTKIDYRGQAVKDEKVS
KDNQSSMKAPAKAANAPPKLTAMLKCNDPVRDKIRELLVEALCRVAGEADDYERESVNAS
DPLRVAVSVESLMFEKLGRSTGAQKLKYRSIMFNLRDSNNPDLRRRVLTGEISPEKLITL
SAEDMASDKRKQENNQIKEKALFDCERGLAAKASTDQFKCGRCGQRKCTYYQMQTRSADE
PMTTYVTCVNCDNHWKFC
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atggagagtgatttgattgatttgttcgagggagctaagaaggcagccgatgcggcggct
cttgacggtgttacctcttcaggtcctgaggtttctcaatgtatcgatgcccttaaacag
ctcaagaagtttcctgtcacatacgataccctcgttgcgactcaggtgggaaagaagctg
aggtctcttgcaaaacatcctgttgaagatatcaaaagcgtagctactgatctgcttgag
atatggaagaaagttgtcattgaagagacagccaaagctaagaaaaccgaaggcactaac
ggttgtaaagaggctaaggtgaataagatggatgttgagaagccttcaaatcctgctcct
gttaaagttcagaaacttcagaggggtgattcggctaagagtatcaaggttgagagaaag
gaacctgacaataaagttgttaccggtgtcaagatagagagaaaggtacctgacatcaaa
gtcaccaatggaaccaagatagattatcgtggtcaggctgtgaaagatgaaaaggtctca
aaggacaaccaatcaagtatgaaagctccagctaaagcagctaatgctcctccaaaacta
actgcaatgctcaaatgcaatgatcctgtgcgtgacaaaatccgtgagttgcttgtggag
gcgttgtgcagggttgctggagaagctgatgactatgagagagagtcagtaaatgctagt
gatcctttacgtgttgctgtctcagtggaatcactgatgtttgagaaattgggtcgctca
actggagctcagaagcttaagtacagatctataatgttcaacctgagggatagtaacaac
ccggacttaagaaggagggttctcactggggagatttcaccagagaaactcataacattg
tctgccgaagatatggcaagtgacaagaggaaacaagagaacaaccagatcaaagagaaa
gccctgtttgattgtgagcgtggtcttgctgcaaaagcatctaccgaccagttcaagtgc
gggcggtgtggtcagcgcaaatgcacctactatcagatgcaaacaagaagtgctgatgag
ccaatgacgacttatgttacatgtgttaactgtgacaaccactggaagttctgttga
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