Arabidopsis thaliana (thale cress): AT2G38610
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Entry
AT2G38610 CDS
T00041
Name
(RefSeq) RNA-binding KH domain-containing protein
KO
K14945
protein quaking
Organism
ath
Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ath03041
]
AT2G38610
Spliceosome [BR:
ath03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
AT2G38610
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KH-I_KHDC4-BBP
STAR_dimer
KH_1
KH_KRR1_2nd
HHO5_N
Motif
Other DBs
NCBI-GeneID:
818443
NCBI-ProteinID:
NP_181395
TAIR:
AT2G38610
UniProt:
Q9ZVI3
LinkDB
All DBs
Position
2:complement(16147106..16149934)
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AA seq
286 aa
AA seq
DB search
MSGLYNNSSYFSPARAASPQIRSTPEIDSSQYLTELLAEHQKLTPFMQVLPICSRLLNQE
MFRVSGMMSNQGFGDFDRLRHRSPSPMASSNLMSNVSNTGLGGWNGLSQERLSGTPGMTM
DWQGAPGSPSSYTVKRILRLEIPVDNYPNFNFVGRLLGPRGNSLKRVEATTGCRVFIRGK
GSIKDPEKEDKLRGRPGYEHLNEQLHILIEADLPASIVEIRLRQAQEIIEELLKPVDESQ
DFIKRQQLRELALLNSNNLREESPGPSGGGSVSPFNSSGKRPKTGC
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgtctggtttatacaataactcatcttacttctctcctgctcgagctgcttctcctcag
attagaagcactcctgagatcgacagctctcagtacttgacggagcttctcgctgaacat
caaaagcttactccttttatgcaggtcctacccatatgtagccgtctattgaatcaagag
atgttcagggtctctggaatgatgtctaaccaaggatttggtgattttgatagacttcga
cacagaagtcccagccctatggcttcttctaatcttatgtctaatgtctctaataccggg
ttaggaggctggaacggcctctctcaggagagacttagtggaacacctggaatgacaatg
gattggcaaggtgcacctggaagccccagttcatacaccgtcaaaaggatattgcgtctg
gagattcctgtagataactatcctaatttcaattttgttggacgacttctcggccctaga
ggcaactcgttaaaacgcgttgaagctaccaccggttgccgagtattcatcagagggaaa
gggtcaatcaaggatcccgaaaaggaagataaattaaggggaagacctggctatgaacac
ttgaatgagcagcttcacatcttaatagaggcagatcttccagctagtattgtggagata
cgtctgcgacaagctcaagaaattatagaagagttactaaagcctgtggacgagtcgcaa
gatttcataaagagacagcagctgagggaactggcattgctaaactcgaacaacctgagg
gaagagagtccggggccaagcggaggtggaagcgtttcgcctttcaattcaagtggtaaa
cgcccgaaaacaggatgctaa
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integrated database retrieval system
