Arabidopsis thaliana (thale cress): AT2G39930
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Entry
AT2G39930 CDS
T00041
Symbol
ISA1
Name
(RefSeq) isoamylase 1
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath00500
Starch and sucrose metabolism
ath01100
Metabolic pathways
ath01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
AT2G39930 (ISA1)
Enzymes [BR:
ath01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
AT2G39930 (ISA1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ISOA1-3_C
Alpha-amylase
CBM_48
Motif
Other DBs
NCBI-GeneID:
818580
NCBI-ProteinID:
NP_181522
TAIR:
AT2G39930
UniProt:
O04196
A0A178VW25
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Position
2:16665851..16672494
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AA seq
783 aa
AA seq
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MDAIKCSSSFLHHTKLNTLFSNHTFPKISAPNFKPLFRPISISAKDRRSNEAENIAVVEK
PLKSDRFFISDGLPSPFGPTVRDDGVNFSVYSTNSVSATICLISLSDLRQNKVTEEIQLD
PSRNRTGHVWHVFLRGDFKDMLYGYRFDGKFSPEEGHYYDSSNILLDPYAKAIISRDEFG
VLGPDDNCWPQMACMVPTREEEFDWEGDMHLKLPQKDLVIYEMHVRGFTRHESSKIEFPG
TYQGVAEKLDHLKELGINCIELMPCHEFNELEYYSYNTILGDHRVNFWGYSTIGFFSPMI
RYASASSNNFAGRAINEFKILVKEAHKRGIEVIMDVVLNHTAEGNEKGPIFSFRGVDNSV
YYMLAPKGEFYNYSGCGNTFNCNHPVVRQFILDCLRYWVTEMHVDGFRFDLGSIMSRSSS
LWDAANVYGADVEGDLLTTGTPISCPPVIDMISNDPILRGVKLIAEAWDAGGLYQVGMFP
HWGIWSEWNGKFRDVVRQFIKGTDGFSGAFAECLCGSPNLYQGGRKPWHSINFICAHDGF
TLADLVTYNNKNNLANGEENNDGENHNYSWNCGEEGDFASISVKRLRKRQMRNFFVSLMV
SQGVPMIYMGDEYGHTKGGNNNTYCHDNYMNYFRWDKKEEAHSDFFRFCRILIKFRDECE
SLGLNDFPTAKRLQWHGLAPEIPNWSETSRFVAFSLVDSVKKEIYVAFNTSHLATLVSLP
NRPGYRWEPFVDTSKPSPYDCITPDLPERETAMKQYRHFLDANVYPMLSYSSIILLLSPI
KDP
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atggatgcaatcaaatgcagttccagtttcctccatcacaccaagctcaacactctcttc
tctaatcacacctttcctaaaatctccgctcccaatttcaagcccctcttccgtccgatt
tcgatttccgcaaaggacagaagaagcaacgaagctgaaaatatcgccgtagtagagaaa
cctcttaaatcagatagattttttatctccgatggacttccttctccattcggacccacc
gtcagagacgacggcgtcaatttctctgtttactctacaaactccgtttccgctaccatc
tgcttgatttctctctccgatctccgtcagaacaaagtgacggaggagattcagcttgat
ccatcaaggaatagaactggccatgtttggcatgtgttcttgagaggagatttcaaagat
atgttgtatggttatagatttgatggcaagttttctcctgaagaaggtcattattatgat
tcctccaacattttattggatccttacgcaaaggcaattataagcagagatgagtttgga
gttttgggacctgatgataattgttggcctcaaatggcgtgtatggtacccactcgtgag
gaagagtttgattgggaaggggatatgcatctgaagcttccacagaaagatcttgttata
tatgaaatgcatgtgcgaggttttacaaggcatgagtctagtaaaattgaattccctggc
acataccagggtgttgcagagaagcttgaccatttgaaggagcttgggataaattgtata
gaattaatgccatgtcacgagtttaatgagctggagtattacagctacaatacgattttg
ggagaccacagggtaaatttttggggttactctaccattgggttcttctcgcccatgatc
agatacgcatcagcaagctctaacaattttgctggacgagccataaatgaattcaaaatt
cttgttaaggaggcacataaacgaggaattgaggtaatcatggatgtcgtcttgaaccac
acagccgaagggaatgaaaaagggcccattttctcatttagaggagttgataacagtgtc
tattacatgcttgctccaaagggcgagttctataattattcaggctgtggtaatacattc
aactgcaatcatcctgtggtgcgtcaattcatattggattgcctgagatattgggttaca
gaaatgcatgttgacggcttccgctttgatcttggttcaatcatgtcaaggagcagcagc
ctttgggatgcagccaatgtttacggggctgatgtagaaggtgacttgctcacaactggt
actcctattagctgccctccagtaattgacatgataagtaatgatccaatactccgcggt
gttaagctaatagctgaagcatgggatgcgggtgggctgtaccaagttggcatgtttcca
cactggggtatttggtctgagtggaatggaaagtttcgggatgttgtgagacagttcata
aaaggcaccgatggcttttctggtgcttttgctgaatgtctctgtggaagcccaaatctg
taccagggaggtaggaaaccttggcacagcatcaattttatatgtgcgcatgatggtttt
acgttggcagatttagtaacttacaacaataagaataacttggcaaatggagaagagaat
aatgatggagagaatcacaattacagctggaactgtggagaggagggagactttgcgagt
atctcggtgaagagactaaggaaacgacagatgcggaatttctttgtttccctcatggtt
tcccaaggtgtcccaatgatttacatgggagatgaatatggccatactaaagggggaaac
aacaacacgtattgccatgacaactatatgaactattttcggtgggataaaaaggaagaa
gcacattctgacttcttcagattctgccgtattcttatcaagtttcgtgatgaatgtgaa
tcacttggcttgaatgatttcccaacagcaaagcgtctgcagtggcatggtcttgctcct
gagatcccaaattggtctgaaacaagtcgatttgttgcattttcactggtcgattctgtg
aagaaagaaatctatgtggccttcaacaccagtcatttagccacacttgtttcgctaccg
aataggccaggataccgatgggagccatttgtagacacgagcaaaccgagcccttacgac
tgcataacaccggatctcccagagagagaaacggcgatgaagcagtataggcacttctta
gatgcaaatgtgtacccaatgctcagttactcatccatcattctccttctttcaccaatt
aaagacccctga
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