Arabidopsis thaliana (thale cress): AT2G39940
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Entry
AT2G39940 CDS
T00041
Symbol
COI1
Name
(RefSeq) RNI-like superfamily protein
KO
K13463
coronatine-insensitive protein 1
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
AT2G39940 (COI1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ath04121
]
AT2G39940 (COI1)
Ubiquitin system [BR:
ath04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
SCF complex
Target recognizing subunit (F-box)
AT2G39940 (COI1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
F-box-like
Motif
Other DBs
NCBI-GeneID:
818581
NCBI-ProteinID:
NP_565919
TAIR:
AT2G39940
UniProt:
O04197
A0A178VMU2
Structure
PDB
PDBj
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All DBs
Position
2:complement(16672493..16675864)
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AA seq
592 aa
AA seq
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MEDPDIKRCKLSCVATVDDVIEQVMTYITDPKDRDSASLVCRRWFKIDSETREHVTMALC
YTATPDRLSRRFPNLRSLKLKGKPRAAMFNLIPENWGGYVTPWVTEISNNLRQLKSVHFR
RMIVSDLDLDRLAKARADDLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKD
GKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILELVGFFK
AAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMGPNEMPILFPFAAQIRKLDL
LYALLETEDHCTLIQKCPNLEVLETRNVIGDRGLEVLAQYCKQLKRLRIERGADEQGMED
EEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERIT
DLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGL
MEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRASMTGQDLMQMARPYW
NIELIPSRRVPEVNQQGEIREMEHPAHILAYYSLAGQRTDCPTTVRVLKEPI
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atggaggatcctgatatcaagaggtgtaaattgagctgcgtcgcgacggttgatgatgtc
atcgagcaagtcatgacctatataactgacccgaaagatcgcgattcggcttctttggtg
tgtcggagatggttcaagattgattccgagacgagagagcatgtgactatggcgctttgc
tacactgcgacgcctgatcgtcttagccgtcgattcccgaacttgaggtcgctcaagctt
aaaggcaagcctagagcagctatgtttaatctgatccctgagaactggggaggttatgtt
actccttgggttactgagatttctaacaaccttaggcagctcaaatcggtgcacttccga
cggatgattgtcagtgacttagatctagatcgtttagctaaagctagagcagatgatctt
gagactttgaagctagacaagtgttctggttttactactgatggacttttgagcatcgtt
acacactgcaggaaaataaaaactttgttaatggaagagagttcttttagtgaaaaggat
ggtaagtggcttcatgagcttgctcagcacaacacatctcttgaggttttaaacttctac
atgacggagtttgccaaaatcagtcccaaagacttggaaaccatagctagaaattgccgc
tctctggtatctgtgaaggtcggtgactttgagattttggaactagttgggttctttaag
gctgcagctaatcttgaagaattttgtggtggctccttgaatgaggatattggaatgcct
gagaagtacatgaatctggtttttccccgaaaactatgtcggcttggtctctcttacatg
ggacctaatgaaatgccaatactatttccattcgcggcccaaatccgaaagctggatttg
ctttatgcattgctagaaactgaagaccattgtacgcttatccaaaagtgtcctaatttg
gaagttctcgagacaaggaatgtaatcggagataggggtctagaggtccttgcacagtac
tgtaagcagttgaagcggctgaggattgaacgcggtgcagatgaacaaggaatggaggac
gaagaaggcttagtctcacaaagaggattaatcgctttggctcagggctgccaggagcta
gaatacatggcggtgtatgtctcagatataactaacgaatctcttgaaagcataggcaca
tatctgaaaaacctctgtgacttccgccttgtcttactcgaccgggaagaaaggattaca
gatctgccactggacaacggagtccgatctcttttgattggatgcaagaaactcagacga
tttgcattctatctgagacaaggcggcttaaccgacttgggcttaagctacatcggacag
tacagtccaaacgtgagatggatgctgctgggttacgtaggtgaatcagatgaaggttta
atggaattctcaagaggctgtccaaatctacagaagctagagatgagaggttgttgcttc
agtgagcgagcaatcgctgcagcggttacaaaattgccttcactgagatacttgtgggta
caaggttacagagcatcgatgacgggacaagatctaatgcagatggctagaccgtactgg
aacatcgagctgattccatcaagaagagtcccggaagtgaatcaacaaggagagataaga
gagatggagcatccggctcatatattggcttactactctctggctggccagagaacagat
tgtccaacaactgttagagtcctgaaggagccaatatga
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integrated database retrieval system