KEGG   Arabidopsis thaliana (thale cress): AT2G39940
Entry
AT2G39940         CDS       T00041                                 
Symbol
COI1
Name
(RefSeq) RNI-like superfamily protein
  KO
K13463  coronatine-insensitive protein 1
Organism
ath  Arabidopsis thaliana (thale cress)
Pathway
ath04075  Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:ath00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04075 Plant hormone signal transduction
    AT2G39940 (COI1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ath04121]
    AT2G39940 (COI1)
Ubiquitin system [BR:ath04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   SCF complex
    Target recognizing subunit (F-box)
     AT2G39940 (COI1)
SSDB
Motif
Pfam: Transp_inhibit F-box_5 LRR_At5g56370 F-box-like
Other DBs
NCBI-GeneID: 818581
NCBI-ProteinID: NP_565919
TAIR: AT2G39940
UniProt: O04197 A0A178VMU2
Structure
LinkDB
Position
2:complement(16672493..16675864)
AA seq 592 aa
MEDPDIKRCKLSCVATVDDVIEQVMTYITDPKDRDSASLVCRRWFKIDSETREHVTMALC
YTATPDRLSRRFPNLRSLKLKGKPRAAMFNLIPENWGGYVTPWVTEISNNLRQLKSVHFR
RMIVSDLDLDRLAKARADDLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKD
GKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILELVGFFK
AAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMGPNEMPILFPFAAQIRKLDL
LYALLETEDHCTLIQKCPNLEVLETRNVIGDRGLEVLAQYCKQLKRLRIERGADEQGMED
EEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERIT
DLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGL
MEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRASMTGQDLMQMARPYW
NIELIPSRRVPEVNQQGEIREMEHPAHILAYYSLAGQRTDCPTTVRVLKEPI
NT seq 1779 nt   +upstreamnt  +downstreamnt
atggaggatcctgatatcaagaggtgtaaattgagctgcgtcgcgacggttgatgatgtc
atcgagcaagtcatgacctatataactgacccgaaagatcgcgattcggcttctttggtg
tgtcggagatggttcaagattgattccgagacgagagagcatgtgactatggcgctttgc
tacactgcgacgcctgatcgtcttagccgtcgattcccgaacttgaggtcgctcaagctt
aaaggcaagcctagagcagctatgtttaatctgatccctgagaactggggaggttatgtt
actccttgggttactgagatttctaacaaccttaggcagctcaaatcggtgcacttccga
cggatgattgtcagtgacttagatctagatcgtttagctaaagctagagcagatgatctt
gagactttgaagctagacaagtgttctggttttactactgatggacttttgagcatcgtt
acacactgcaggaaaataaaaactttgttaatggaagagagttcttttagtgaaaaggat
ggtaagtggcttcatgagcttgctcagcacaacacatctcttgaggttttaaacttctac
atgacggagtttgccaaaatcagtcccaaagacttggaaaccatagctagaaattgccgc
tctctggtatctgtgaaggtcggtgactttgagattttggaactagttgggttctttaag
gctgcagctaatcttgaagaattttgtggtggctccttgaatgaggatattggaatgcct
gagaagtacatgaatctggtttttccccgaaaactatgtcggcttggtctctcttacatg
ggacctaatgaaatgccaatactatttccattcgcggcccaaatccgaaagctggatttg
ctttatgcattgctagaaactgaagaccattgtacgcttatccaaaagtgtcctaatttg
gaagttctcgagacaaggaatgtaatcggagataggggtctagaggtccttgcacagtac
tgtaagcagttgaagcggctgaggattgaacgcggtgcagatgaacaaggaatggaggac
gaagaaggcttagtctcacaaagaggattaatcgctttggctcagggctgccaggagcta
gaatacatggcggtgtatgtctcagatataactaacgaatctcttgaaagcataggcaca
tatctgaaaaacctctgtgacttccgccttgtcttactcgaccgggaagaaaggattaca
gatctgccactggacaacggagtccgatctcttttgattggatgcaagaaactcagacga
tttgcattctatctgagacaaggcggcttaaccgacttgggcttaagctacatcggacag
tacagtccaaacgtgagatggatgctgctgggttacgtaggtgaatcagatgaaggttta
atggaattctcaagaggctgtccaaatctacagaagctagagatgagaggttgttgcttc
agtgagcgagcaatcgctgcagcggttacaaaattgccttcactgagatacttgtgggta
caaggttacagagcatcgatgacgggacaagatctaatgcagatggctagaccgtactgg
aacatcgagctgattccatcaagaagagtcccggaagtgaatcaacaaggagagataaga
gagatggagcatccggctcatatattggcttactactctctggctggccagagaacagat
tgtccaacaactgttagagtcctgaaggagccaatatga

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