KEGG   Arabidopsis thaliana (thale cress): AT2G40650
Entry
AT2G40650         CDS       T00041                                 
Name
(RefSeq) PRP38 family protein
  KO
K12849  pre-mRNA-splicing factor 38A
Organism
ath  Arabidopsis thaliana (thale cress)
Pathway
ath03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ath00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    AT2G40650
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ath03041]
    AT2G40650
Spliceosome [BR:ath03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    AT2G40650
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    AT2G40650
SSDB
Motif
Pfam: PRP38 PRP38_assoc HIND
Other DBs
NCBI-GeneID: 818660
NCBI-ProteinID: NP_565937
TAIR: AT2G40650
UniProt: Q8LB54 A0A178VVG9
LinkDB
Position
2:complement(16963286..16965798)
AA seq 355 aa
MANRTDPLAKNIRGTNPQNLVEKIVRTKIYQHTFWKEQCFGLTAETLVDKAMELDHLGGT
FGGSRKPTPFLCLILKMLQIQPEKEIVVEFIKNDDYKYVRILGAFYLRLTGTDVDVYRYL
EPLYNDYRKVRQKLSDGKFSLTHVDEVIEELLTKDYSCDIAMPRLKKRWTLEQNGLLEPR
KSVLEDDFEEEEEKEENEGIADGSEDEMDQRRKSPERERERDRDRRRDSHRHRDRDYDRD
YDMDRDHDRDYERERGHGRDRDRERDRDHYRERDRDRERGRDRERDRRDRARRRSRSRSR
DRKRHETDDVRDREEPKKKKEKKEKMKEDGTDHPNPEIAEMNRLRASLGMKPLRD
NT seq 1068 nt   +upstreamnt  +downstreamnt
atggcaaacagaacagatccgttggcaaagaatataagaggaacgaatccgcagaatctg
gtagagaagattgtgcgaacgaagatttatcagcacaccttttggaaggagcagtgcttt
ggtctcacggcggagacattggtggacaaagctatggagctcgaccatctaggtggtacc
tttggtggtagccgcaagcctactccgttcctttgcctcatattgaagatgcttcaaatc
cagcctgagaaggaaattgtcgtggagttcataaaaaatgatgactacaaatatgttcgt
attcttggtgcgttctatctgcgtctcactgggactgatgttgatgtctatcgctacctc
gaacctctctacaatgactaccggaaagtgagacaaaagttatctgatgggaagttttcg
ctgacacatgtggacgaagtcattgaggaacttctaaccaaggattattcttgtgatatt
gcaatgccacgtttgaagaaaaggtggacgcttgaacagaatggtttattagagccaagg
aaaagtgttttggaagacgactttgaagaagaggaagaaaaggaggagaatgaagggatt
gctgatggatctgaagatgagatggatcagcgccgtaagagtcctgaaagagaaagagaa
agagacagagacaggagacgcgacagtcatagacacagggatcgtgattatgacagagac
tatgatatggatcgagatcatgacagagactatgaaagagaacgtgggcatggtcgagac
cgggatagggagagagacagggatcactatagagagcgagatagggacagggaaagaggc
agagatagagaacgagacagaagagacagggcaaggcgcagaagtagaagcaggagtagg
gatcgtaagagacatgaaactgatgatgtgcgggatcgggaagaacctaagaaaaagaaa
gaaaagaaggagaagatgaaggaagatggaaccgatcatccaaatcctgaaattgcagag
atgaatagactgagagcatcactgggaatgaaacccctcagggactga

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