Arabidopsis thaliana (thale cress): AT2G40830
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Entry
AT2G40830 CDS
T00041
Symbol
RHC1A
Name
(RefSeq) RING-H2 finger C1A
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
ath
Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ath04131
]
AT2G40830 (RHC1A)
04121 Ubiquitin system [BR:
ath04121
]
AT2G40830 (RHC1A)
Enzymes [BR:
ath01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
AT2G40830 (RHC1A)
Membrane trafficking [BR:
ath04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
AT2G40830 (RHC1A)
Ubiquitin system [BR:
ath04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
AT2G40830 (RHC1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-C3HC4_2
zf-rbx1
zf-RING_11
zf-RING_UBOX
zf-C3HC4
zf-ANAPC11
zf-C3HC4_3
zf-RING_5
Rad50_zn_hook
zf-Nse
zf-RING_16
DUF5318
DZR_2
zf-FPG_IleRS
Zn_ribbon_6
CxC4
Motif
Other DBs
NCBI-GeneID:
818680
NCBI-ProteinID:
NP_001324188
TAIR:
AT2G40830
UniProt:
O22197
LinkDB
All DBs
Position
2:17042623..17044915
Genome browser
AA seq
328 aa
AA seq
DB search
MSSSRNTHWCHRCQRAVRLHGQEPVCFYCGGGFVEELDMAQASPFDMFRSHRGVVERDQT
FDLMDAFSVFMRNRLAERSHDREIRGRTISSGPENFPGLAPLLIFGGQVPYRLTGDNAVE
ALFNGGSPGIGITRGNTGDYFFGPGLEELFEQLSAGTTRRGPPPAPRSAIDALPTIKIAQ
RHLRSSDSNCPVCKDEFELGSEAKQMPCNHIYHSDCIVPWLVQHNSCPVCRQELPSASGP
SSSQNRTTPTRNYRSSSSSSSSNSRENGNERRNPFSSFWPFRSSGSSSSSTQNRGGTRNS
DTSDENHNYHQQQHQQSYMGYSGWPFDY
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagcagtcgaaatacccactggtgtcacagatgtcagcgtgctgtccgccttcac
ggccaagagcctgtatgcttttattgcggaggtggatttgttgaagaacttgatatggct
caagccagcccctttgatatgtttagatcccacaggggtgttgtagaacgtgatcagact
tttgatctcatggatgctttctctgtgtttatgaggaaccgcttagctgaaaggagccac
gacagagaaatcagaggaagaaccatcagttcaggtcctgaaaactttcctggtctggcc
cctttgttgatctttggtggtcaagtcccttatagactaactggcgacaatgcagtcgaa
gccctcttcaatggcggctcccctggcattggcatcacacgtggtaacaccggcgactac
ttcttcggtcccggccttgaagaattgttcgagcagctttcagctggcactactcgccga
ggcccaccacccgcaccgagatcagcaatagacgcattgccaactatcaagatcgcgcag
aggcatcttaggtcatcggactcgaattgtcccgtgtgcaaagacgaattcgaactggga
tcagaagcgaaacagatgccgtgtaaccacatctatcattctgactgcattgtcccgtgg
ctggttcagcacaactcttgcccggtctgtcgccaagagctaccatcagctagcggacct
tcaagcagtcaaaacagaaccacccctaccagaaactacagaagcagtagtagtagtagt
agtagtaacagtcgtgagaacgggaatgaaagaaggaatcctttctcttccttctggcca
ttccgttcgtcaggttcaagctcaagctccactcaaaaccgtggaggcacaagaaactcg
gatacaagcgatgagaaccataactaccatcaacagcaacatcaacaatcatatatgggt
tacagtggctggccttttgattactaa
DBGET
integrated database retrieval system
