Arabidopsis thaliana (thale cress): AT2G41100
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Entry
AT2G41100 CDS
T00041
Symbol
TCH3
Name
(RefSeq) Calcium-binding EF hand family protein
KO
K13448
calcium-binding protein CML
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
AT2G41100 (TCH3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_1
EF-hand_7
EF-hand_5
EF-hand_6
EF-hand_8
EF-hand_9
AIF-1
EF-hand_FSTL1
EH
SPARC_Ca_bdg
Dockerin_1
UPF0154
EF_EFCAB10_C
SAPC2_N
ORF68_C
Motif
Other DBs
NCBI-GeneID:
818709
NCBI-ProteinID:
NP_181643
TAIR:
AT2G41100
UniProt:
P25071
A0A654F633
LinkDB
All DBs
Position
2:17137037..17139700
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AA seq
324 aa
AA seq
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MADKLTDDQITEYRESFRLFDKNGDGSITKKELGTMMRSIGEKPTKADLQDLMNEADLDG
DGTIDFPEFLCVMAKNQGHDQAPRHTKKTMADKLTDDQITEYRESFRLFDKNGDGSITKK
ELRTVMFSLGKNRTKADLQDMMNEVDLDGDGTIDFPEFLYLMAKNQGHDQAPRHTKKTMV
DYQLTDDQILEFREAFRVFDKNGDGYITVNELRTTMRSLGETQTKAELQDMINEADADGD
GTISFSEFVCVMTGKMIDTQSKKETYRVVNQGQGQVQRHTRNDRAGGTNWERDIAVGVAS
NIIASPISDFMKDRFKDLFEALLS
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atggcggataagctcactgacgatcagattacagaatacagggaatctttcaggttattc
gacaagaatggtgatggttccattacgaaaaaggagctcggtaccatgatgcgttcaatc
ggtgaaaaaccgacaaaagctgatcttcaggacttgatgaacgaagcggatttagatggt
gatggaaccatcgatttccctgagttcttgtgcgtaatggctaagaatcaaggtcatgat
caagcgccgcgtcacactaaaaaaacaatggcggataagctcactgacgatcagattaca
gagtacagggaatctttcaggttattcgacaagaatggtgatggttccattacgaaaaag
gagctccgtaccgtgatgttttccctcggtaaaaaccggacaaaagctgatcttcaggac
atgatgaacgaagtggatttagatggtgatggaaccatcgatttccctgagttcttgtac
ctaatggctaagaatcaaggtcatgatcaagcgccgcgtcacactaaaaaaacaatggtg
gattatcagctcactgacgatcagatcttagaattcagggaagccttccgcgtattcgac
aagaatggtgatggttacattaccgtgaatgagctccgtactactatgcgctcccttggt
gaaacccaaacaaaagctgagctccaggacatgatcaacgaagcggatgcagatggtgac
ggaaccatcagtttctctgagtttgtgtgtgtaatgactggtaaaatgattgacactcag
tctaagaaagaaacgtacagagttgtgaatcaaggtcagggtcaagtgcagcgtcacact
agaaatgacagagctggtggcaccaattgggagagggacatagcggtcggggttgccagc
aatatcatcgcttcgccaatttccgacttcatgaaagataggtttaaagatttgttcgaa
gcgctgttatcttga
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