Arabidopsis thaliana (thale cress): AT2G41980
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Entry
AT2G41980 CDS
T00041
Name
(RefSeq) Protein with RING/U-box and TRAF-like domain
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
AT2G41980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ath04121
]
AT2G41980
Enzymes [BR:
ath01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
AT2G41980
Ubiquitin system [BR:
ath04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
AT2G41980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
zf-C3HC4_3
zf-Di19
zf-RING_UBOX
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
818798
NCBI-ProteinID:
NP_181729
TAIR:
AT2G41980
UniProt:
P93748
A0A178VZ75
LinkDB
All DBs
Position
2:complement(17523071..17526126)
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AA seq
305 aa
AA seq
DB search
MAPGGSALKEALESNSTGVDYEVKMAKVEANSKPTKSGSGSIGKFHSSNGVYELLECPVC
TNLMYPPIHQCPNGHTLCSSCKLRVQNTCPTCRYELGNIRCLALEKVAESLEVPCRYQNL
GCQDIFPYYSKLKHEQHCRFRSYSCPYAGSECSVTGDIPTLVDHLKDDHKVDMHDGCTFN
HRYVKSNPHEVENATWMLTVFNCFGRQFCLHFEAFQLGMAPVYMAFLRFMGDENEAKKFS
YSLEVGAHSRKLTWQGIPRSIRDSHRKVRDSQDGLIIPRNLALYFSGSDKEELKLRVTGR
IWKEE
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atggctcctggtggcagtgcattgaaagaagctctagaatctaactcgacaggcgtagat
tatgaggttaagatggcaaaggttgaggctaatagcaaaccaacaaaatcaggtagtggc
tccattggaaaattccattcgagcaatggtgtttatgagctccttgaatgtccggtttgt
acaaatttaatgtatcctccaattcatcagtgcccgaacggccacacattgtgttcaagc
tgcaaactgagagtgcagaacacatgccctacatgccgctatgagcttggtaacataaga
tgcttggctcttgagaaggttgcggaatcattggaagttccatgccggtaccaaaattta
gggtgtcaggacattttcccatactacagcaagctcaagcacgagcagcattgcaggttt
cgatcctacagctgtccttatgctggttctgagtgttcagtgacgggtgatattccaacg
cttgttgaccatctcaaagatgatcataaagttgacatgcatgatgggtgcactttcaac
catcgttatgtgaagtcaaatccgcatgaggtcgagaatgctacatggatgcttacggtc
ttcaactgtttcggaagacagttctgcttacactttgaggcgtttcagctcgggatggca
ccagtgtacatggcgtttctaaggtttatgggagacgagaacgaggctaagaagttcagt
tacagcttggaagttggagctcacagtcgtaaactaacatggcaagggatcccaagaagc
atcagagacagtcacaggaaagtccgagatagtcaagacggactcataatccctagaaac
ttggctttgtacttctctggcagtgacaaagaagagctcaagttgcgagtcactggacgg
atttggaaagaagaataa
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integrated database retrieval system
