Arabidopsis thaliana (thale cress): AT2G46340
Help
Entry
AT2G46340 CDS
T00041
Symbol
SPA1
Name
(RefSeq) SPA (suppressor of phyA-105) protein family
KO
K16240
protein suppressor of PHYA-105 1 and protein SPA1-related 2
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
AT2G46340 (SPA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ath04121
]
AT2G46340 (SPA1)
Ubiquitin system [BR:
ath04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Multi subunit type E3 associated proteins
AT2G46340 (SPA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EIPR1
Beta-prop_EML_2
WDR55
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
EIF3I
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_DCAF4
Pkinase
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_HPS5
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_NUP159_NUP214
WD40_RFWD3
Beta-prop_DCAF12
WD40_like
PK_Tyr_Ser-Thr
Motif
Other DBs
NCBI-GeneID:
819242
NCBI-ProteinID:
NP_001325255
TAIR:
AT2G46340
UniProt:
Q9SYX2
A0A178VSM9
LinkDB
All DBs
Position
2:complement(19022154..19027528)
Genome browser
AA seq
1029 aa
AA seq
DB search
MPVMERVAEETVATNNIQLKARVDDVPCNKLDARHNDMVIQSETANSDCPGSSAHRNVDL
TKPPPPEEAAGAKLSVEELTLGNYRIVQGSNNTNVDSPRAGKFEHLYRLARGSAFRAGDG
DLDSQPRDMDQMLSRIRQQLAGAPSERQNLKPFMSRRSDQNLEAFSERLRAAGENSIMNA
PALISEGVQMKTPVSSSNFSQLLLKRAMKGKGVVGKNQETPPEFVSDQDLGSKEKKLDIS
KSPTPHDVLPLKSSPKGNGMVSHGDGNHSKSSIGISLREFLRSSYAKREKRHGLCLFRQL
VELVDSAHSKRLFLLDLRPSLFTLVPSKKLRYIGNFGKNDLESDVDEDLNRRRPVVEESS
SGGRDSKKRKMDLHLNSPGNQLQATSTGRPFKRKSPVIDLNMVDARNPDSCELQQQDYIK
NLSVSSVSRKQSMSTWLEEQWYTCPEEINGEDIGEKSNIYALGVLLFELLCHCESGEMHA
AMMADLRHRILPPTFLSKYPKEAGFCLWLLHPEPSSRPSARDILKSELICEDDSVKSTAA
AEEISELLLHFLSSLEVQKKKKASKLLQDIQTLEDDIKEAERRYSSNVSLVRSHGAIEKR
VQSSPLDEHCTTSSALFVPTANTDRLMSNIRQLEDAYFFMRSQINLSSSAATARSDKTLK
DRDRCSENQNENQDMSTKGKSSDQLEVFFEGLCKFARYSKFETCGTIRSGDLLNSASVVC
SLSFDPDEEHIAAAGISKKIKIFDFNAFMNESVGVHYPLVEMVNKSKLSCVCWNSYIKNY
LASTDYDGVVQIWDAGTGQGFSQYTEHQKRAWSVDFSPSDPTKFVSGSDDCSVKLWSINE
KRSLGTIWSPANVCCVQFSSYSNHLLAFGSADYKVYCYDLRYVKTPWCTLAGHEKAVSYV
KFMDSETIVSASTDNSLKLWNLNKTNSSGLSPGACSLTYKGHTNQKNFVGLSVLDGYIAC
GSETNEVYSYYKSLPMPMTSYKFGSVDPISGNEYFDDNGQFVSSVCWRKKSNMLVAANST
GNMKLLKLV
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atgcctgttatggaaagagtagctgaagaaactgtggcgactaacaacatacaattgaaa
gcacgagtggatgatgttccttgtaataagcttgatgctcgtcataacgatatggtgatt
caatcagaaactgcaaacagtgattgtcctggaagctcagctcacaggaatgttgatttg
actaagccgccgcctcctgaggaagccgcaggagctaagctttctgttgaagagttgaca
ttggggaactacaggattgttcaagggagtaataatactaatgtggatagtcctagggct
ggcaagtttgagcatctttatcgtttggctagagggtctgcttttagggcaggagatggg
gatcttgattctcaacctcgtgatatggatcaaatgttgtccagaatcagacaacagctt
gctggagctccttctgagaggcaaaacttgaaaccttttatgtctaggaggagcgatcag
aatcttgaagctttttctgaacgtctaagagcagctggtgagaatagtattatgaatgct
cctgcattgatcagtgaaggtgtccaaatgaaaacgccggtgagttcttcgaatttttct
cagttgttacttaaaagagctatgaaagggaaaggggtagtaggaaagaaccaggaaact
cctcctgaatttgtctctgatcaagatttaggaagcaaggaaaaaaagttggatattagc
aagtcgcctactcctcacgatgtgttacctctaaaatcaagtcccaaaggaaatggtatg
gtatcacatggtgatgggaatcatagtaaatcttctattggaatcagtttgagggagttt
cttagatcaagttatgctaaaagagaaaaaagacatggcctttgtctatttaggcagctg
gtggaactggttgactcagcccattcaaaaagattattcttgctagacttgagaccatcc
cttttcactttagttccatcaaagaaacttagatatattggtaattttggaaagaacgat
ctagaatcagatgttgacgaagatttgaataggaggaggcctgttgttgaggaatcatct
agtggaggtagggattcgaagaaaagaaaaatggacttgcatttgaattctccagggaat
caacttcaggccacttcaaccgggcgacctttcaaaaggaaaagccctgtgattgattta
aacatggttgatgcacgtaatccagacagttgcgagcttcaacagcaagactacataaaa
aatttaagcgtgtcttcagtgtcgagaaaacagtctatgtccacatggctagaagagcaa
tggtatacttgtccagaggagataaatggagaagatattggagaaaaatcaaatatttat
gcccttggtgttcttctgtttgagttgctatgccattgcgagtcaggcgagatgcatgct
gcaatgatggcagatttacgccatcggattctcccaccaacatttctctcgaaatacccg
aaggaagctggattttgtctttggcttctacatcctgaaccctcctcccgaccatcagct
agagatatactaaagtcagagttgatatgcgaggatgattcagttaaatcgactgctgct
gctgaggagatatctgagctgttacttcattttttgtcttcattagaagtgcagaagaag
aaaaaagcatctaaacttttgcaagatatccagaccttagaggatgatattaaggaggcc
gagcgaagatattcttcaaatgtatctctggtgagatctcatggagctattgaaaaaagg
gtgcaatcatctcccctagacgagcactgtacaacttccagtgccttgtttgtaccaact
gctaatacagacaggctgatgagtaatatccgtcaacttgaagatgcatattttttcatg
cgatcacaaatcaacttatcgagttctgctgctactgcccgttctgacaaaacactaaag
gacagggacagatgctctgaaaaccaaaatgaaaatcaggatatgagtaccaaaggaaaa
tcttcagatcaactcgaagtgtttttcgaggggttgtgcaaatttgctcggtatagcaag
ttcgaaacctgtgggacaataagaagtggggaccttttaaactctgcaagtgtggtctgc
tcgttgagttttgaccctgatgaagaacacatagcagcagctgggatatcaaagaagatc
aagatttttgacttcaatgcatttatgaatgaatctgtcggtgttcattatccactagta
gagatggtcaacaaatctaaattaagctgtgtttgctggaatagctacatcaaaaactac
ttggcctcgactgactacgatggtgtagttcagatatgggatgccggcactggacaagga
ttttcgcagtacacagaacaccagaagagagcctggtcagttgatttttctccatctgac
ccgacaaaatttgttagtggaagtgatgactgctcggtgaagctttggagcatcaatgag
aaacgttcattaggcacaatctggagtccagcaaatgtgtgttgcgtgcaattctcttct
tattccaatcacttattggcatttgggtcagctgattacaaggtctattgctatgacctt
cggtatgtcaaaacaccttggtgcacattggctggtcatgagaaagcggtgagttatgtt
aaatttatggattcagaaaccattgtttctgcttccactgataactctctcaagctttgg
aatcttaacaagacaaattcctctggtttatctcctggtgcttgttcattgacatataaa
ggacatacaaatcagaagaatttcgttggattgtcggttttggacggatacatagcttgt
ggttcagagaccaatgaggtatatagttactataaatctttaccgatgccaatgacttca
tacaagtttggatccgtcgatcccatttctggaaacgaatactttgatgacaatggacag
tttgtgtcgagcgtctgttggaggaaaaaatcgaatatgcttgtagctgcaaactctact
ggaaacatgaagctactaaaacttgtttga
Arabidopsis thaliana (thale cress): AT4G11110
Help
Entry
AT4G11110 CDS
T00041
Symbol
SPA2
Name
(RefSeq) SPA1-related 2
KO
K16240
protein suppressor of PHYA-105 1 and protein SPA1-related 2
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
AT4G11110 (SPA2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ath04121
]
AT4G11110 (SPA2)
Ubiquitin system [BR:
ath04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Multi subunit type E3 associated proteins
AT4G11110 (SPA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_C
WDR55
EIF3I
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Pkinase
Beta-prop_WDR19_1st
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_DCAF4
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
WD40_like
Beta-prop_NUP159_NUP214
Beta-prop_SCAP
Beta-prop_IFT140_1st
WD_LRWD1
PK_Tyr_Ser-Thr
Motif
Other DBs
NCBI-GeneID:
826712
NCBI-ProteinID:
NP_192849
TAIR:
AT4G11110
UniProt:
Q9T014
LinkDB
All DBs
Position
4:6771605..6777225
Genome browser
AA seq
1036 aa
AA seq
DB search
MMDEGSVGDVSRIDEADVAHLQFKNSEQSFKPENIEVREVKEVQVQREAGSPDCSYGVIA
DFLDGKNGGDHVELIGNEPCSSRQNTNDEGDVVEELTVKTCEGSSMAIVGRPSSRARLEM
NRSQFLHRFPLDGDLPGSSSMSKKVIDRGTVSILRNAGKMSLPETSNGQLAIIAVNGEAN
EHLTNVERNPVPVEALSHEGIKTKMLSQSGFSQFFVRKTLKGKGVTFRGPPNNRSKARNM
DQQTVASSGSALVIANTSAKISSSIPLAAYDGLPCLPSNTSKPSSCANPSDTHRGCGGEG
LSLREWLKSERQEVNKAECMYIFRQIVDHVDCSHSQGVVLCDLRPSSFKIFKENAVKYVV
SGSQRESFDSNMNKETLSQLENPLVRRRLGDTSSLSIPAKKQKSSGPSSRQWPMFQRAGG
VNIQTENNDGAIQEFHFRSSQPHCSTVACPFTSVSEQLEEKWYASPEELRGDMRSASSNI
YSLGILLYELLSQFQCERAREAAMSDIRHRILPPKFLSENPKEAGFCLWLLHPESSCRPS
TRDILQSEVVNGIPDLYAEGLSLSIEQEDTESELLQHFLFLSQEKRQKHAGNLMEEIASV
EADIEEIVKRRCAIGPPSLEEASSSSPASSVPEMRLIRNINQLESAYFAARIDAHLPEAR
YRLRPDRDLLRNSDNTVAEVENSETWSSDDRVGAFFDGLCKYARYSKFETRGVLRTSELN
NTSNVICSLGFDRDEDYFATAGVSKKIKIYEFNSLFNESVDIHYPAIEMPNRSKLSGVCW
NNYIRNYLASSDYDGIVKLWDVTTGQAISHFIEHEKRAWSVDFSEACPTKLASGSDDCSV
KLWNINERNCLGTIRNIANVCCVQFSPQSSHLLAFGSSDFRTYCYDLRNLRTPWCILSGH
NKAVSYAKFLDNETLVTASTDNTLKLWDLKKTTHGGLSTNACSLTFGGHTNEKNFVGLST
SDGYIACGSETNEVYAYHRSLPMPITSYKFGSIDPISGKEIEEDNNLFVSSVCWRKRSNM
VVSASSNGSIKVLQLV
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atgatggatgagggatcagtaggggatgtgagtaggattgatgaagctgatgttgctcac
cttcaattcaagaatagtgagcagtcgtttaaaccggagaacattgaagtccgggaagta
aaagaagtgcaggttcagagagaagctggttctcctgattgttcttatggtgtaatagca
gattttttagatggtaagaatggtggtgaccatgtggagcttatagggaatgaaccatgt
tctagccggcagaatacaaatgatgagggggatgttgtcgaggagttgactgttaaaact
tgtgagggatcgagtatggctatagttggtagaccaagtagtagagctagattagagatg
aatcgcagtcagtttctgcatcgttttccgctagacggtgatttaccgggtagtagttct
atgagtaagaaggtaattgacaggggaacagtaagtatcttgagaaatgctgggaaaatg
tctttgcctgagacttcaaatggacaactggctattattgctgttaatggagaagctaat
gaacatttgacaaatgttgaacgaaatcctgtacctgtagaggcattgtctcatgaaggc
atcaagacaaagatgttatcgcagtctgggttttctcagttttttgttagaaaaacattg
aaagggaagggagttactttcagaggcccgccaaacaatagatctaaagcgaggaatatg
gatcagcaaactgtagctagttctggtagcgctttagtaatagctaatacttcagcaaag
atttctagcagcatccctttggcggcttatgatggtttgccgtgcttaccttccaatacc
agtaaaccatcttcttgtgctaatccttcagatacacatagaggttgtggaggtgaaggt
ttaagtctgagagaatggttgaagtcggagcggcaggaagttaataaagcagaatgtatg
tatatctttaggcagatcgtggatcatgtggactgttctcattctcaaggagttgtttta
tgtgacctgcgaccatcttcattcaaaattttcaaggaaaatgcagtaaagtatgtggtt
tcaggttctcaacgagagtcttttgacagcaacatgaacaaagagactttaagtcaactc
gaaaaccctctggttagaagacggttaggagatacttctagtctctctatccctgcaaag
aagcagaaatcaagtggaccaagctctagacagtggcctatgtttcaacgagctggtggc
gtcaatatccaaactgaaaataatgatggcgcgatacaggagtttcatttcagatctagt
caacctcattgtagtacagttgcctgcccttttacttcagtgagtgagcagttggaagag
aaatggtatgcgagccctgaggagctcaggggtgacatgcgttcagcctcttcaaacatc
tatagtttgggtattcttctttatgagttgctgagccaatttcagtgtgaaagagctcgt
gaggctgcaatgtctgatatccgacaccgcattcttcctcccaaatttctgtcggagaat
ccaaaggaagctgggttttgtctttggttacttcatccagaatcttcatgccgaccatca
accagggacatcttacaatctgaagtagttaatggaatcccggatttgtatgctgaaggc
ttatctttatccattgaacaagaggacacagagtctgaactcttgcagcatttccttttc
ttgtcccaagagaaaaggcagaagcatgctggaaatttgatggaagaaattgcgtccgta
gaagcagatatcgaggaaattgtcaagagacgttgtgccatagggcctccgtccctggaa
gaagcttctagctcatctcctgcttctagtgtacctgaaatgagactgatcaggaacatt
aatcagcttgaaagcgcttatttcgctgcaaggatagacgcacatctccctgaagcacgt
tataggttacgcccagatagagatctgctaagaaatagtgataatactgtagcagaagta
gaaaacagtgagacttggagctcagatgatcgtgttggagcgttctttgatgggttatgc
aaatatgctcgatatagtaagtttgaaactcggggtgtgctgaggaccagtgagttgaac
aacacttcaaatgtgatttgttctctgggttttgatcgggacgaggattattttgccaca
gctggtgtgtcgaaaaaaattaagatatatgagttcaattcccttttcaacgaatctgtt
gacattcattatccagccatagaaatgccaaatagatcaaagcttagcggcgtttgctgg
aacaactacattaggaactacctagcttcctctgattatgatggtattgtcaagttatgg
gatgtgacaacaggacaggccatttcacatttcatagagcatgagaagagggcttggtct
gttgacttctctgaagcttgtccgacaaaattagccagtggaagcgatgattgttctgtg
aagctatggaacatcaatgagaggaactgcttaggaacaatcaggaacattgcaaacgtt
tgttgtgtgcaattttctccacagtcctctcacttgctagcctttggatcatcagacttc
agaacctactgctatgatctaaggaatttaagaactccttggtgcatactgtcaggacac
aacaaagcagttagctatgcgaagttcttggataatgaaactcttgtaacagcatcaact
gataacacgttaaagctttgggatcttaagaaaaccactcacggtggcctctcaacaaat
gcttgcagcttaacttttggcggccatacaaatgagaagaactttgttggtttgtctact
tctgatggatatatagcttgtggctctgagacaaatgaggtttatgcctatcaccggtct
cttcccatgccaattacctcgtacaagtttggttctattgatccaatatcaggtaaggag
atagaggaggacaacaacctgttcgtttcaagcgtttgctggagaaaaagatcgaatatg
gttgtttcagctagctcaaatgggtcaatcaaagttctacagttggtctga
DBGET
integrated database retrieval system
