Arabidopsis thaliana (thale cress): AT2G47580
Help
Entry
AT2G47580 CDS
T00041
Symbol
U1A
Name
(RefSeq) spliceosomal protein U1A
KO
K11091
U1 small nuclear ribonucleoprotein A
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
AT2G47580 (U1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ath03041
]
AT2G47580 (U1A)
Spliceosome [BR:
ath03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
AT2G47580 (U1A)
Complex B
AT2G47580 (U1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_occluded
xRRM
Calcipressin
RRM_PARP14_3
DUF4523
Motif
Other DBs
NCBI-GeneID:
819371
NCBI-ProteinID:
NP_182280
TAIR:
AT2G47580
UniProt:
Q39244
A0A178VZ67
LinkDB
All DBs
Position
2:19517187..19518913
Genome browser
AA seq
250 aa
AA seq
DB search
MEMQEANQGGGSEVSPNQTIYINNLNEKVKLDELKKSLNAVFSQFGKILEILAFKTFKHK
GQAWVVFDNTESASTAIAKMNNFPFYDKEMRIQYAKTKSDVVAKADGTFVPREKRKRHEE
KGGGKKKKDQHHDSTQMGMPMNSAYPGVYGAAPPLSQVPYPGGMKPNMPEAPAPPNNILF
VQNLPHETTPMVLQMLFCQYQGFKEVRMIEAKPGIAFVEFADEMQSTVAMQGLQGFKIQQ
NQMLITYAKK
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atggagatgcaagaggctaatcaaggaggaggatcggaggtttctccgaatcagacgatt
tacatcaacaatctcaacgaaaaagtgaagcttgatgagctgaagaaatcgctgaatgca
gtgttctctcagttcgggaagatactggagatattggcgtttaagacctttaagcacaaa
ggacaagcttgggtagtcttcgacaacaccgagtctgcttccactgctattgctaaaatg
aataattttcctttctacgacaaggagatgagaatacaatatgccaaaacaaaatcagat
gttgttgccaaggccgatggtacatttgttcctcgcgagaagagaaagagacatgaggag
aaaggaggcggcaagaaaaagaaagaccagcaccatgattctacacagatgggcatgccc
atgaactcagcatatccaggtgtctatggagctgcacctcctctatcgcaagtaccatac
cctggtggtatgaaacccaatatgcccgaggcaccagctccgccaaataatattctcttt
gtccaaaaccttcctcacgagacaactccaatggtgcttcagatgttgttctgccagtac
caaggatttaaggaagttagaatgattgaagccaaaccgggaatcgcctttgtggagttt
gctgatgagatgcagtcgacggtcgcaatgcagggacttcaaggtttcaagattcagcaa
aaccagatgctcatcacgtatgccaagaaatag
DBGET
integrated database retrieval system
