Arabidopsis thaliana (thale cress): AT2G47620
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Entry
AT2G47620 CDS
T00041
Symbol
SWI3A
Name
(RefSeq) SWITCH/sucrose nonfermenting 3A
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
AT2G47620 (SWI3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ath03021
]
AT2G47620 (SWI3A)
03036 Chromosome and associated proteins [BR:
ath03036
]
AT2G47620 (SWI3A)
Transcription machinery [BR:
ath03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
AT2G47620 (SWI3A)
Chromosome and associated proteins [BR:
ath03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
AT2G47620 (SWI3A)
PBAF complex
AT2G47620 (SWI3A)
GBAF(ncBAF) complex
AT2G47620 (SWI3A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
BPS1
MSL1_dimer
Motif
Other DBs
NCBI-GeneID:
819375
NCBI-ProteinID:
NP_850476
TAIR:
AT2G47620
UniProt:
Q8W475
A0A5S9X7U2
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All DBs
Position
2:19531939..19534471
Genome browser
AA seq
512 aa
AA seq
DB search
MEATDPSAEIELYTIPAQSSWFLWDDIHEIERREFAEFFTESSITRTPKVYKEYRDFIIN
KFREDTCRRLTFTSVRKFLVGDVNLLQKVFLFLEKWGLINFSSSLKKNDHLLSVDNAKIE
QGTPAGIRVTATPNSLRPITAPPLVEERVETGIKVPPLTSYSDVFSDLKKPDHVLVCAHC
GERCDSPFYQHNKGIVNICEKCFKNGNYGENNTADDFKLIGNSAAAVWTEEEILLLLESV
LKHGDDWELISQSVSTKSRLDCISKLIELPFGEFLMGSASGRLNPSILTEDENTEQVQTD
GQEHEETETREEKEDRVNEDEPPAKRKRVALISEGDSSLMKQVAAMASKVGPSVATAAAK
AALAALCDEASCPKEIFDTDDYSNFTVDRANGEKDTDMEEQQEEKDGPQGLPVALRIRAS
VATALGAAAAQAKILADQEEREMEQLAATVIEQQLKKLQSKLKFLDDLESIMDEEEKVIE
GVKETIIQERVSVLQCAFRSGITKRWDHTYVK
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atggaagccactgatccaagcgcagagatcgagctctacaccattcctgctcaatccagt
tggttcttatgggatgatatacacgaaattgaaagacgcgagtttgcggagttcttcact
gagagctcaatcactagaacccccaaagtttacaaggagtaccgagatttcattatcaat
aagtttagagaggacacttgtcggagactcaccttcaccagtgtccgcaagtttcttgtt
ggcgatgtcaatttgctccagaaagtttttctcttcctcgaaaaatggggattgatcaat
tttagctcttccctgaagaaaaatgaccatctattgtccgtggataatgctaaaatagaa
caagggactcctgctggaattcgagttactgcaacccctaattctcttaggcctataacc
gcaccgccccttgttgaggaaagagttgagactggcatcaaagtaccaccgcttacctct
tattcagatgttttcagtgatttgaagaagccggatcatgtattggtttgtgcgcattgt
ggagaacgttgcgattctcctttctatcaacataacaagggtatagtcaacatatgcgaa
aagtgtttcaagaatggaaactatggggagaacaacactgcagatgattttaagttgatt
gggaattcagctgcagctgtgtggacagaggaagagatcctcctcttgctagaatctgtg
ctgaaacatggagatgattgggaactcatttcacaaagtgtttctaccaagagtagacta
gattgcatttctaaactcattgagctcccgtttggagagtttctgatgggttctgcttct
ggaagactcaatccctctatcctcaccgaggatgaaaacacggaacaggtgcaaactgat
gggcaggaacatgaggaaacagagacaagggaagaaaaagaagatcgcgtgaatgaagat
gagcctccagcaaaaaggaaacgtgttgcactgatatcagagggtgatagttcacttatg
aaacaggtcgctgccatggcaagtaaagttggtccatctgtcgcaactgctgctgcaaaa
gctgcacttgcagctctttgtgatgaagcctcatgtccaaaagagatttttgacactgat
gactacagcaatttcacagttgatagagccaatggagagaaagatacagatatggaggaa
cagcaagaagagaaagacgggcctcagggtctacctgtagcgttaaggataagagcgtct
gtggcaacagctctaggagctgcggctgcacaagcgaaaatactggctgatcaagaagaa
agagaaatggaacagttagctgcgacagtaatagaacaacagctgaagaaactgcagagc
aagttgaagtttctagacgacttggaatcgataatggatgaagaagagaaagtgatagag
ggtgtaaaggaaacaatcatccaagagagggttagcgttttgcaatgcgcgtttagaagc
ggtattaccaaacgttgggatcatacgtacgtgaaatga
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