Arabidopsis thaliana (thale cress): AT3G01150
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Entry
AT3G01150 CDS
T00041
Symbol
PTB1
Name
(RefSeq) polypyrimidine tract-binding protein 1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
ath
Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ath03041
]
AT3G01150 (PTB1)
Spliceosome [BR:
ath03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
AT3G01150 (PTB1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_8
RRM_10
DUF8400
DUF4523
FlgA_N
Motif
Other DBs
NCBI-GeneID:
821129
NCBI-ProteinID:
NP_186764
TAIR:
AT3G01150
UniProt:
Q9MAC5
A0A384LJ51
B9DFT7
LinkDB
All DBs
Position
3:51496..54544
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AA seq
399 aa
AA seq
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MSSSGQTQFRYTQTPSKVVHLRNLPWECVEEELIDLCKRFGKIVNTKSNVGANRNQAFVE
FADLNQAISMVSYYASSSEPAQIRGKTVYIQYSNRHEIVNNQSPGDVPGNVLLVTFEGVE
SHEVSIDVIHLVFSAFGFVHKIATFEKAAGFQALVQFTDVETASAARSALDGRSIPRYLL
SAHVGSCSLRMSYSAHTDLNIKFQSHRSRDYTNPYLPVNQTAMDGSMQPALGADGKKVES
QSNVLLGLIENMQYAVTVDVLHTVFSAYGTVQKIAIFEKNGSTQALIQYSDIPTAAMAKE
ALEGHCIYDGGYCKLRLSYSRHTDLNVKAFSDKSRDYTLPDLSLLVAQKGPAVSGSAPPA
GWQNPQAQSQYSGYGGSPYMYPSSDPNGASPSGQPPYYG
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagctcaggccaaactcagttccgttatacacagacgccgtcgaaggtggttcat
ctgcggaatcttccatgggaatgcgtcgaagaggagctcatcgacctttgcaaacgattc
ggcaagatcgtcaataccaagagcaatgtcggcgccaatcgcaatcaagctttcgtcgaa
tttgctgacttgaatcaagctatatcaatggtttcgtattatgcttcatcttcagagccc
gcacagattcgtgggaaaactgtctatattcagtactctaatcgccatgagattgttaac
aatcagagtcctggagatgtccctggaaatgtcctcttggttacctttgaaggagtggaa
tctcacgaagtcagcatcgatgttatccatctggtattttctgcttttggatttgtgcat
aaaattgccacatttgagaaagctgctggtttccaggcactagttcaatttactgatgtg
gagactgcatccgcggcaaggagtgcgttggatggcagaagtatacccaggtatctgctt
tccgcacatgttggttcgtgcagtttgcgaatgtcttattcagctcatactgatctcaac
atcaagtttcagtcccaccggagcagagattacacaaatccataccttccagtgaatcag
accgcaatggatgggtctatgcagcctgctttaggtgctgacggcaagaaagttgaatct
cagagcaacgtccttctcggtttgattgagaatatgcagtatgctgtcactgtggatgtt
cttcacacggtgttttctgcatatggaactgtccagaagattgctatatttgagaagaat
ggttcaacgcaagcattaattcaatactctgatataccaacagcagcaatggccaaagaa
gcactggaaggacactgcatttatgacggtggctactgtaagcttcgactatcatactct
cgtcatactgatctgaatgttaaggcttttagcgacaaaagcagagactatacacttcct
gatctaagcctacttgtggcacaaaaaggtcccgcggtgtcgggttctgcaccaccagca
ggttggcagaacccgcaagcgcaaagtcaatactcaggttatggcggaagcccatatatg
tacccatcatctgatcccaacggggcttcaccctcaggtcaacctccttactatggatga
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