Arabidopsis thaliana (thale cress): AT3G01320
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Entry
AT3G01320 CDS
T00041
Symbol
SNL1
Name
(RefSeq) SIN3-like 1
KO
K11644
paired amphipathic helix protein Sin3a
Organism
ath
Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ath03036
]
AT3G01320 (SNL1)
Chromosome and associated proteins [BR:
ath03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
AT3G01320 (SNL1)
REST complex
AT3G01320 (SNL1)
Heterochromatin formation proteins
Other heterochromatin formation proteins
AT3G01320 (SNL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAH
Sin3a_C
Sin3_corepress
PAH_ZNF598
Motif
Other DBs
NCBI-GeneID:
821265
NCBI-ProteinID:
NP_186781
TAIR:
AT3G01320
UniProt:
Q9SRH9
LinkDB
All DBs
Position
3:106294..113679
Genome browser
AA seq
1372 aa
AA seq
DB search
MKRIRDDVYASGSQFRRPLGSSRGQLCGQSPVHGSGDTEEEEEGGSRRVSQKLTTNDALS
YLREVKEMFQDQREKYDRFLEVMKDFKAQRTDTGGVIARVKELFKGHNNLIYGFNTFLPK
GYEITLIEEDDALPKKTVEFEQAINFVNKIKMRFKHDEHVYKSFLEILNMYRKENKEIKE
VYNEVSILFQGHLDLLEQFTRFLPASLPSHSAAQHSRSQAQQYSDRGSDPPLLHQMQVEK
ERRRERAVALRGDYSVERYDLNDDKTMVKIQREQRKRLDKENRARRGRDLDDREAGQDNL
HHFPEKRKSSRRAEALEAYSGSASHSEKDNLKSMYKQAFVFCEKVKDRLCSQDDYQTFLK
CLNIFSNGIIQRKDLQNLVSDLLGKFPDLMDEFNQFFERCESITDGFQRLAGVMSKKLFS
SEEQLSRPMKVEEKESEHKPELEAVKETEQCKKEYMGKSIQELDLSDCECCTPSYRLLPA
DYPIPIASQRSELGAEVLNDHWVSVTSGSEDYSFKHMRRNQYEESLFRCEDDRFELDMLL
ESVSSAARSAESLLNIITEKKISFSGSFRIEDHFTALNLRCIERLYGDHGLDVIDILNKN
PATALPVILTRLKQKQGEWKKCRDDFDKVWANVYAKNHYKSLDHRSFYFKQQDSKNLSAK
SLLAEIKELKEKSQNDDDVLLSISAGYRQPINPNLEYEYLNRAIHEDMFKVVQFSCEELC
STKEQLSKVLRLWENFLEAVLGVPPRAKGTDLVEDVVINPKTLDVNHSTSPNGEAAVSSG
GDTARLASRKLKSAANGDENSSSGTFKHGIGLLNKDSTGKENLEDVEIANRDGVACSAVK
PQKEQETGNEAEKRFGKPIPMDISERAAISSISIPSGAENNHCVVGKEVLPGAHEIQAKP
SDTLTDIHHDVDSIETVHSTQGGDVGNSIVLANGLRSDSSKGTRNSDDPEGPSRNEKEEG
ELSPNGDFEDNFGVYKDHGVKSTSKPENSAEAEVEADAEVENEDDADDVDSENASEASGT
ESGGDVCSQDEDREEENGEHDEIDGKAESEGEAEGMDPHLLEGESELLPQSERVLLSVRP
LSKHVAAVLCDERTKDLQVFYGNDDFYVLFRLHQILYERILYAKRNCSGGELKSKNLKDT
NAGDPYARFMRVLYGLLDGSAENTKFEDECRAIIGNQSYVLFTLDKLIYRLVKQLQAIVA
DEMDNKLLQLYEYEKSRKPGRVIDSVYYENVRVLVHEENIYRLECSSLPSRLSIQLMDNI
IEKPEAYAVSMDPTFASYMQTELLSVSSGKKEEGHDIVLQRNLTGLYDLCKAMEGVEVVN
GLECKMSCSSYKIAYVLDTEDYFHRKKKKKKTEQLWQRNKVRVERFHRFLSA
NT seq
4119 nt
NT seq
+upstream
nt +downstream
nt
atgaagcggataagagatgatgtatatgcctctgggtctcaatttagacgtcctcttggt
tcttctcgaggccaattatgtggacaatctccggtccacggcagtggtgacaccgaagaa
gaagaagaaggagggagccggagagtctctcagaaattgacaaccaatgatgcgttgtcg
tacctgagggaagtaaaagagatgtttcaagatcaacgcgagaaatatgacaggttcctc
gaggttatgaaagattttaaggctcaaagaaccgacacaggcggtgtgatcgcaagagtt
aaggaattgtttaagggacataataatttgatttatggattcaacacctttttgcctaag
ggatatgaaattacgcttattgaggaagacgacgctctgccaaagaagactgttgaattc
gaacaagccatcaattttgtgaataaaattaagatgcgattcaagcacgatgaacatgtc
tataaatctttcttggaaatcttgaatatgtaccgaaaggagaacaaggaaattaaagag
gtgtacaacgaggtatctattctttttcaaggccacttggatttgcttgaacagtttact
aggtttttgccagcgtctttgccatctcattcagcagcgcagcatagccggagtcaggct
caacagtacagcgaccgaggatcagaccctcctctacttcatcaaatgcaagtggaaaag
gaacgccgacgagaaagggctgttgctctccgcggtgattatagtgttgaacgttatgac
cttaatgatgataaaacgatggtgaagattcaaagagagcagcggaagcgccttgataag
gagaacagggcaaggagaggccgtgatttggacgatagagaagcaggtcaagataaccta
caccattttccagagaaaagaaagtcgtccagaagagctgaagctcttgaagcatattct
ggttctgcttcacattctgagaaagacaatttgaaaagtatgtacaaacaagcattcgtt
ttctgtgagaaagtcaaggatagactatgcagccaagatgattatcagacattcttgaag
tgcctcaatatttttagcaatggaataatccaaaggaaggatctgcaaaacttggtttct
gatcttcttgggaaatttcctgatctgatggatgagttcaaccagttcttcgagcggtgt
gagagtattactgatggatttcagcgtcttgctggtgttatgagcaaaaaattatttagc
agcgaagaacagttatccaggccaatgaaggtggaagagaaagaaagtgaacacaagcct
gaactcgaggctgtgaaggaaactgagcaatgcaagaaggagtacatgggaaaatctatt
caagagctcgatctctctgattgcgagtgttgcactcctagctaccggcttctgcctgcg
gattatccgataccaattgcgagtcagagatcggagctaggagctgaggttttaaatgat
cattgggtatctgtcacttccggaagtgaagattattcttttaagcacatgcgcagaaac
caatatgaagagagcttgttcagatgcgaagatgatagatttgagttggacatgttgctg
gaatctgtgagctctgcggccagaagtgcagaaagtttgttgaacatcatcacagagaag
aaaataagtttttctggctccttcaggatcgaagaccattttacggccctaaatttaagg
tgtattgagcgactttatggcgaccatggtcttgacgtgatagacatattaaataagaat
ccagccactgcacttcctgtaatcctaactcgtttaaagcagaaacaaggtgaatggaag
aaatgccgtgacgattttgataaggtctgggcgaacgtatatgcaaaaaaccattacaag
tcacttgatcaccgcagcttctacttcaagcaacaagattcaaagaacttgagtgcaaaa
tcattgttggctgaaattaaggagctgaaagagaagtctcagaatgatgatgatgttctg
ttgtctatttctgctggttacagacaacctataaatcctaatcttgaatatgagtatttg
aacagagctattcatgaagacatgttcaaagtagtccagttttcatgtgaggagttatgt
tctacaaaagaacagctcagtaaagttctgaggctttgggaaaatttcctggaggcagtg
ctgggtgttcctcccagggccaagggcacagatcttgttgaagatgttgtaataaacccc
aagactctcgatgtgaatcacagcacatctcctaacggggaggctgctgtgagttctgga
ggagacacagcaaggttggcttctaggaaacttaaatctgctgccaatggagatgagaat
tcttcatctgggacattcaaacatgggataggtttgttaaataaagattcgacagggaaa
gaaaatcttgaagatgttgaaatagctaacagagatggtgttgcctgctctgctgtgaaa
cctcagaaagaacaagaaactggaaatgaagccgagaaaaggtttggaaaacctatccca
atggatattagcgaaagagcagccatctcgagtatatcaatcccaagtggggcagaaaac
aatcattgtgtagtaggcaaggaagttttgccaggtgcacatgagattcaagccaaacca
agcgacaccctcactgatattcatcatgatgtagatagcattgaaactgttcattcgact
cagggaggtgatgttggcaattcgatagttttggcaaatggattaaggtcagattcttct
aaaggtactaggaattctgatgatcccgaaggtccctccagaaatgagaaagaggaaggt
gaactgtcacctaatggtgattttgaagacaactttggtgtttacaaagatcatggggtg
aagtccacatccaaaccagagaattcagcagaggctgaagtagaggcagatgctgaagta
gagaatgaggacgatgctgacgatgttgatagtgaaaatgcttccgaggcatctggaact
gaatctggtggcgacgtatgttctcaggacgaagatagagaggaggagaatggtgagcat
gatgagatcgatggtaaagctgagagtgaaggagaagcggagggaatggatccacatctc
ttagaaggagaaagtgagctgcttccacagtcagaacgtgttctcttatccgtcagaccc
ctttcaaagcatgtcgcagcagttttatgcgatgagagaacaaaagatctccaagttttc
tatgggaatgacgacttttatgttctttttaggcttcaccaaatcctgtacgagagaatt
ttgtatgcaaaaaggaattgctcaggcggtgaactgaaatcgaaaaacttaaaggatacc
aatgccggagatccttatgcgaggtttatgagggttttgtatggtttgctagatggatca
gctgaaaataccaagtttgaggatgagtgcagagctataattggaaaccaatcatatgtg
ttattcacgttggacaaactgatttacagattggttaagcagcttcaagctattgtagcc
gatgaaatggacaacaagctgcttcagttgtatgagtatgagaaatcccggaaaccagga
agggttatcgactcagtgtattatgaaaatgttagggtcctcgttcacgaggaaaatatt
taccggttggaatgttcatccttgccttcacgtttatctatccagcttatggataacata
atcgagaagccagaagcatatgcagtttctatggatcccacatttgcaagttatatgcaa
actgagttgctttccgtctcatcaggaaagaaagaggagggacatgacattgtattacaa
aggaacctcaccgggttgtatgatctctgtaaagctatggaaggtgtcgaagtagtaaat
ggcttggaatgcaagatgtcttgctcttcttacaagatcgcgtacgtattggacacagag
gattacttccacaggaagaagaagaaaaagaagactgaacagttatggcaacgtaacaag
gtgagagtagaaaggttccataggtttctctcagcttaa
DBGET
integrated database retrieval system