KEGG   Arabidopsis thaliana (thale cress): AT3G01320
Entry
AT3G01320         CDS       T00041                                 
Symbol
SNL1
Name
(RefSeq) SIN3-like 1
  KO
K11644  paired amphipathic helix protein Sin3a
Organism
ath  Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:ath00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ath03036]
    AT3G01320 (SNL1)
Chromosome and associated proteins [BR:ath03036]
 Eukaryotic type
  Histone modification proteins
   HDAC complexes
    Sin3A-HDAC complex
     AT3G01320 (SNL1)
    REST complex
     AT3G01320 (SNL1)
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    AT3G01320 (SNL1)
SSDB
Motif
Pfam: PAH Sin3a_C Sin3_corepress PAH_ZNF598
Other DBs
NCBI-GeneID: 821265
NCBI-ProteinID: NP_186781
TAIR: AT3G01320
UniProt: Q9SRH9
LinkDB
Position
3:106294..113679
AA seq 1372 aa
MKRIRDDVYASGSQFRRPLGSSRGQLCGQSPVHGSGDTEEEEEGGSRRVSQKLTTNDALS
YLREVKEMFQDQREKYDRFLEVMKDFKAQRTDTGGVIARVKELFKGHNNLIYGFNTFLPK
GYEITLIEEDDALPKKTVEFEQAINFVNKIKMRFKHDEHVYKSFLEILNMYRKENKEIKE
VYNEVSILFQGHLDLLEQFTRFLPASLPSHSAAQHSRSQAQQYSDRGSDPPLLHQMQVEK
ERRRERAVALRGDYSVERYDLNDDKTMVKIQREQRKRLDKENRARRGRDLDDREAGQDNL
HHFPEKRKSSRRAEALEAYSGSASHSEKDNLKSMYKQAFVFCEKVKDRLCSQDDYQTFLK
CLNIFSNGIIQRKDLQNLVSDLLGKFPDLMDEFNQFFERCESITDGFQRLAGVMSKKLFS
SEEQLSRPMKVEEKESEHKPELEAVKETEQCKKEYMGKSIQELDLSDCECCTPSYRLLPA
DYPIPIASQRSELGAEVLNDHWVSVTSGSEDYSFKHMRRNQYEESLFRCEDDRFELDMLL
ESVSSAARSAESLLNIITEKKISFSGSFRIEDHFTALNLRCIERLYGDHGLDVIDILNKN
PATALPVILTRLKQKQGEWKKCRDDFDKVWANVYAKNHYKSLDHRSFYFKQQDSKNLSAK
SLLAEIKELKEKSQNDDDVLLSISAGYRQPINPNLEYEYLNRAIHEDMFKVVQFSCEELC
STKEQLSKVLRLWENFLEAVLGVPPRAKGTDLVEDVVINPKTLDVNHSTSPNGEAAVSSG
GDTARLASRKLKSAANGDENSSSGTFKHGIGLLNKDSTGKENLEDVEIANRDGVACSAVK
PQKEQETGNEAEKRFGKPIPMDISERAAISSISIPSGAENNHCVVGKEVLPGAHEIQAKP
SDTLTDIHHDVDSIETVHSTQGGDVGNSIVLANGLRSDSSKGTRNSDDPEGPSRNEKEEG
ELSPNGDFEDNFGVYKDHGVKSTSKPENSAEAEVEADAEVENEDDADDVDSENASEASGT
ESGGDVCSQDEDREEENGEHDEIDGKAESEGEAEGMDPHLLEGESELLPQSERVLLSVRP
LSKHVAAVLCDERTKDLQVFYGNDDFYVLFRLHQILYERILYAKRNCSGGELKSKNLKDT
NAGDPYARFMRVLYGLLDGSAENTKFEDECRAIIGNQSYVLFTLDKLIYRLVKQLQAIVA
DEMDNKLLQLYEYEKSRKPGRVIDSVYYENVRVLVHEENIYRLECSSLPSRLSIQLMDNI
IEKPEAYAVSMDPTFASYMQTELLSVSSGKKEEGHDIVLQRNLTGLYDLCKAMEGVEVVN
GLECKMSCSSYKIAYVLDTEDYFHRKKKKKKTEQLWQRNKVRVERFHRFLSA
NT seq 4119 nt   +upstreamnt  +downstreamnt
atgaagcggataagagatgatgtatatgcctctgggtctcaatttagacgtcctcttggt
tcttctcgaggccaattatgtggacaatctccggtccacggcagtggtgacaccgaagaa
gaagaagaaggagggagccggagagtctctcagaaattgacaaccaatgatgcgttgtcg
tacctgagggaagtaaaagagatgtttcaagatcaacgcgagaaatatgacaggttcctc
gaggttatgaaagattttaaggctcaaagaaccgacacaggcggtgtgatcgcaagagtt
aaggaattgtttaagggacataataatttgatttatggattcaacacctttttgcctaag
ggatatgaaattacgcttattgaggaagacgacgctctgccaaagaagactgttgaattc
gaacaagccatcaattttgtgaataaaattaagatgcgattcaagcacgatgaacatgtc
tataaatctttcttggaaatcttgaatatgtaccgaaaggagaacaaggaaattaaagag
gtgtacaacgaggtatctattctttttcaaggccacttggatttgcttgaacagtttact
aggtttttgccagcgtctttgccatctcattcagcagcgcagcatagccggagtcaggct
caacagtacagcgaccgaggatcagaccctcctctacttcatcaaatgcaagtggaaaag
gaacgccgacgagaaagggctgttgctctccgcggtgattatagtgttgaacgttatgac
cttaatgatgataaaacgatggtgaagattcaaagagagcagcggaagcgccttgataag
gagaacagggcaaggagaggccgtgatttggacgatagagaagcaggtcaagataaccta
caccattttccagagaaaagaaagtcgtccagaagagctgaagctcttgaagcatattct
ggttctgcttcacattctgagaaagacaatttgaaaagtatgtacaaacaagcattcgtt
ttctgtgagaaagtcaaggatagactatgcagccaagatgattatcagacattcttgaag
tgcctcaatatttttagcaatggaataatccaaaggaaggatctgcaaaacttggtttct
gatcttcttgggaaatttcctgatctgatggatgagttcaaccagttcttcgagcggtgt
gagagtattactgatggatttcagcgtcttgctggtgttatgagcaaaaaattatttagc
agcgaagaacagttatccaggccaatgaaggtggaagagaaagaaagtgaacacaagcct
gaactcgaggctgtgaaggaaactgagcaatgcaagaaggagtacatgggaaaatctatt
caagagctcgatctctctgattgcgagtgttgcactcctagctaccggcttctgcctgcg
gattatccgataccaattgcgagtcagagatcggagctaggagctgaggttttaaatgat
cattgggtatctgtcacttccggaagtgaagattattcttttaagcacatgcgcagaaac
caatatgaagagagcttgttcagatgcgaagatgatagatttgagttggacatgttgctg
gaatctgtgagctctgcggccagaagtgcagaaagtttgttgaacatcatcacagagaag
aaaataagtttttctggctccttcaggatcgaagaccattttacggccctaaatttaagg
tgtattgagcgactttatggcgaccatggtcttgacgtgatagacatattaaataagaat
ccagccactgcacttcctgtaatcctaactcgtttaaagcagaaacaaggtgaatggaag
aaatgccgtgacgattttgataaggtctgggcgaacgtatatgcaaaaaaccattacaag
tcacttgatcaccgcagcttctacttcaagcaacaagattcaaagaacttgagtgcaaaa
tcattgttggctgaaattaaggagctgaaagagaagtctcagaatgatgatgatgttctg
ttgtctatttctgctggttacagacaacctataaatcctaatcttgaatatgagtatttg
aacagagctattcatgaagacatgttcaaagtagtccagttttcatgtgaggagttatgt
tctacaaaagaacagctcagtaaagttctgaggctttgggaaaatttcctggaggcagtg
ctgggtgttcctcccagggccaagggcacagatcttgttgaagatgttgtaataaacccc
aagactctcgatgtgaatcacagcacatctcctaacggggaggctgctgtgagttctgga
ggagacacagcaaggttggcttctaggaaacttaaatctgctgccaatggagatgagaat
tcttcatctgggacattcaaacatgggataggtttgttaaataaagattcgacagggaaa
gaaaatcttgaagatgttgaaatagctaacagagatggtgttgcctgctctgctgtgaaa
cctcagaaagaacaagaaactggaaatgaagccgagaaaaggtttggaaaacctatccca
atggatattagcgaaagagcagccatctcgagtatatcaatcccaagtggggcagaaaac
aatcattgtgtagtaggcaaggaagttttgccaggtgcacatgagattcaagccaaacca
agcgacaccctcactgatattcatcatgatgtagatagcattgaaactgttcattcgact
cagggaggtgatgttggcaattcgatagttttggcaaatggattaaggtcagattcttct
aaaggtactaggaattctgatgatcccgaaggtccctccagaaatgagaaagaggaaggt
gaactgtcacctaatggtgattttgaagacaactttggtgtttacaaagatcatggggtg
aagtccacatccaaaccagagaattcagcagaggctgaagtagaggcagatgctgaagta
gagaatgaggacgatgctgacgatgttgatagtgaaaatgcttccgaggcatctggaact
gaatctggtggcgacgtatgttctcaggacgaagatagagaggaggagaatggtgagcat
gatgagatcgatggtaaagctgagagtgaaggagaagcggagggaatggatccacatctc
ttagaaggagaaagtgagctgcttccacagtcagaacgtgttctcttatccgtcagaccc
ctttcaaagcatgtcgcagcagttttatgcgatgagagaacaaaagatctccaagttttc
tatgggaatgacgacttttatgttctttttaggcttcaccaaatcctgtacgagagaatt
ttgtatgcaaaaaggaattgctcaggcggtgaactgaaatcgaaaaacttaaaggatacc
aatgccggagatccttatgcgaggtttatgagggttttgtatggtttgctagatggatca
gctgaaaataccaagtttgaggatgagtgcagagctataattggaaaccaatcatatgtg
ttattcacgttggacaaactgatttacagattggttaagcagcttcaagctattgtagcc
gatgaaatggacaacaagctgcttcagttgtatgagtatgagaaatcccggaaaccagga
agggttatcgactcagtgtattatgaaaatgttagggtcctcgttcacgaggaaaatatt
taccggttggaatgttcatccttgccttcacgtttatctatccagcttatggataacata
atcgagaagccagaagcatatgcagtttctatggatcccacatttgcaagttatatgcaa
actgagttgctttccgtctcatcaggaaagaaagaggagggacatgacattgtattacaa
aggaacctcaccgggttgtatgatctctgtaaagctatggaaggtgtcgaagtagtaaat
ggcttggaatgcaagatgtcttgctcttcttacaagatcgcgtacgtattggacacagag
gattacttccacaggaagaagaagaaaaagaagactgaacagttatggcaacgtaacaag
gtgagagtagaaaggttccataggtttctctcagcttaa

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