Arabidopsis thaliana (thale cress): AT3G01540
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Entry
AT3G01540 CDS
T00041
Symbol
DRH1
Name
(RefSeq) DEAD box RNA helicase 1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
AT3G01540 (DRH1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ath03041
]
AT3G01540 (DRH1)
03009 Ribosome biogenesis [BR:
ath03009
]
AT3G01540 (DRH1)
Enzymes [BR:
ath01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AT3G01540 (DRH1)
Spliceosome [BR:
ath03041
]
Complex A
U1 snRNP components
U1 related factors
AT3G01540 (DRH1)
Complex B
AT3G01540 (DRH1)
Ribosome biogenesis [BR:
ath03009
]
Eukaryotic type
Pre-60S particles
Helicases
AT3G01540 (DRH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
WW
SNF2-rel_dom
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
821116
NCBI-ProteinID:
NP_850492
TAIR:
AT3G01540
UniProt:
Q8H136
A0A654F363
LinkDB
All DBs
Position
3:complement(212518..216736)
Genome browser
AA seq
619 aa
AA seq
DB search
MAATAAASVVRYAPEDHTLPKPWKGLIDDRTGYLYFWNPETNVTQYEKPTPSLPPKFSPA
VSVSSSVQVQQTDAYAPPKDDDKYSRGSERVSRFSEGGRSGPPYSNGAANGVGDSAYGAA
STRVPLPSSAPASELSPEAYSRRHEITVSGGQVPPPLMSFEATGFPPELLREVLSAGFSA
PTPIQAQSWPIAMQGRDIVAIAKTGSGKTLGYLIPGFLHLQRIRNDSRMGPTILVLSPTR
ELATQIQEEAVKFGRSSRISCTCLYGGAPKGPQLRDLERGADIVVATPGRLNDILEMRRI
SLRQISYLVLDEADRMLDMGFEPQIRKIVKEIPTKRQTLMYTATWPKGVRKIAADLLVNP
AQVNIGNVDELVANKSITQHIEVVAPMEKQRRLEQILRSQEPGSKVIIFCSTKRMCDQLT
RNLTRQFGAAAIHGDKSQPERDNVLNQFRSGRTPVLVATDVAARGLDVKDIRAVVNYDFP
NGVEDYVHRIGRTGRAGATGQAFTFFGDQDSKHASDLIKILEGANQRVPPQIREMATRGG
GGMNKFSRWGPPSGGRGRGGDSGYGGRGSFASRDSRSSNGWGRERERSRSPERFNRAPPP
SSTGSPPRSFHETMMMKHR
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atggctgctaccgctgctgcttctgttgtccgttacgcacctgaggatcatactcttccc
aagccctggaaaggccttatcgatgatagaactggttacttgtacttttggaatcctgag
accaatgttactcagtacgagaaaccaaccccctctctacctcctaagttttctcccgcc
gtttctgttagctcttccgttcaggttcaacaaactgatgcctatgctcctcccaaggat
gacgataagtactccagaggctctgaacgtgtgtccaggttttctgagggtggcaggagt
ggaccgccttattcgaacggtgctgctaatggagttggggattctgcttatggtgcagca
tctaccagagttcctcttccttcatcagctccagcaagtgaactatcccctgaggcctat
tcccgccgtcatgaaattactgtcagtgggggccaagtaccaccacctctaatgtccttt
gaagctactggttttccacctgagcttctgcgggaggtactcagtgcaggtttctctgct
ccaactccaattcaagctcagtcatggcccattgctatgcaaggtagggacatagtagcc
attgctaaaactggctcgggaaaaactttgggttacttgattcctggatttttgcatctt
caacgtatccgaaatgattcgcgaatgggcccaacaatcttggtattgtctccaacgaga
gagctggccacacaaatccaagaagaagctgttaaatttgggaggtcatcaagaatttcg
tgtacgtgtttgtatggtggtgcaccaaagggccctcagttgagggatttagaaagagga
gcagatatcgtggttgcaactcctgggagattgaatgatatccttgaaatgaggaggatt
agtctgcgtcagatatcttatcttgtgctagatgaggcagatagaatgttggacatgggt
tttgaacctcagataaggaagattgtgaaagaaattcccactaagcgtcaaacccttatg
tacacagctacatggccaaagggagttaggaaaattgcagctgacttgcttgttaaccct
gctcaagtcaacattggcaatgttgacgagcttgtggctaacaagtcaatcacacagcat
attgaagtggtagcaccaatggagaaacagaggaggttagagcagatcttgcggtctcag
gaaccaggctcaaaggtgataatattctgctcaaccaaaaggatgtgtgatcaactaaca
cgcaatctaacccgccaatttggagctgctgctatacatggagacaagtcccagcctgag
agagacaatgttcttaatcaattccgcagtggcagaactccggttcttgtagcaaccgat
gttgctgctcgtggtctggacgttaaggacatcagggcggtcgtaaactatgatttcccc
aatggagtggaagactatgttcatagaatcggaagaacaggaagagctggagcgactggt
caggcattcacattctttggtgatcaagattcgaaacatgcttcggatctgatcaagatt
ttggaaggagcaaaccagcgagttcctcctcagatccgcgaaatggctacacgtggtggt
gggggaatgaacaaattcagtcgttggggacctccttccggcggccgtggtcgtggtggc
gactctggttatggtggcagaggtagctttgcttcccgtgacagtagaagcagcaatgga
tggggaagagagcgagaaaggagccgtagccctgagagattcaacagagctccaccaccg
tcttccaccggatctcctcctcgcagcttccacgagacgatgatgatgaaacacagatga
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