Arabidopsis thaliana (thale cress): AT3G01610
Help
Entry
AT3G01610 CDS
T00041
Symbol
CDC48C
Name
(RefSeq) cell division cycle 48C
KO
K14571
ribosome biogenesis ATPase
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
AT3G01610 (CDC48C)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ath03009
]
AT3G01610 (CDC48C)
Ribosome biogenesis [BR:
ath03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
AT3G01610 (CDC48C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
AAA_5
TIP49
AAA_22
AAA_2
AAA_16
AAA_14
RNA_helicase
AAA_28
AAA_17
nSTAND3
AAA_18
AAA_33
NPHP3_N
IstB_IS21
Mg_chelatase
Viral_helicase1
Parvo_NS1
Bac_DnaA
NB-ARC
AAA_3
Cytidylate_kin2
AAA_11
SR-25
CobT
Motif
Other DBs
NCBI-GeneID:
821105
NCBI-ProteinID:
NP_186810
TAIR:
AT3G01610
UniProt:
Q9SS94
A0A178V5U0
LinkDB
All DBs
Position
3:231610..235279
Genome browser
AA seq
820 aa
AA seq
DB search
MGRRGRGGGGGMGGGINRRYLSQVMDTCGKDLSTAEDIVDDLRSRYGNFARLTRQVLLLN
VRQVLNVRNNKRVKDEDEDDNIGDEEGSASQRKKQRRVDEKEEKLQRAEQSHLRKRNMER
SVSSSPSSSSSSEDSGDVSTSEDAVYGEKLSPPRFDLINDSLRDNYAKLNSSSKKPIGSP
AEKNVEVETVSNKGRSKLATMGARKEAKVSLSLSGATGNGDLEVEGTKGPTFKDFGGIKK
ILDELEMNVLFPILNPEPFKKIGVKPPSGILFHGPPGCGKTKLANAIANEAGVPFYKISA
TEVISGVSGASEENIRELFSKAYRTAPSIVFIDEIDAIGSKRENQQREMEKRIVTQLLTC
MDGPGNKGDKNAPDSSAGFVLVIGATNRPDALDPALRRSGRFETEIALTAPDEDARAEIL
SVVAQKLRLEGPFDKKRIARLTPGFVGADLESVAYLAGRKAIKRILDSRKSEQSGDGEDD
KSWLRMPWPEEELEKLFVKMSDFEEAVNLVQASLTREGFSIVPDVKWDDVGGLDHLRLQF
NRYIVRPIKKPDIYKAFGVDLETGFLLYGPPGCGKTLIAKAAANEAGANFMHIKGAELLN
KYVGESELAIRTLFQRARTCAPCVIFFDEVDALTTSRGKEGAWVVERLLNQFLVELDGGE
RRNVYVIGATNRPDVVDPAFLRPGRFGNLLYVPLPNADERASILKAIARKKPIDPSVDLD
GIAKNNCEGFSGADLAHLVQKATFQAVEEMIGSSESSEDDVTDITQCTIKTRHFEQALSL
VSPSVNKQQRRHYDALSTKLQESVGRNTEQVTIGPSFTLE
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atggggaggagaggtcgcggcggcggcggtggtatgggcggaggaatcaatcgtagatat
ctgagtcaagttatggatacgtgcggcaaggatttatctacggcggaggacatcgttgat
gatcttcgttccaggtacggcaattttgcgaggttgactcggcaagtgcttctactcaat
gtcaggcaagtccttaatgttagaaacaacaagagggttaaagacgaagatgaagatgac
aacattggagatgaggaaggttctgcttctcagaggaagaaacagagacgggttgatgag
aaagaggagaaattgcagcgagcggagcagtcgcatttaaggaagaggaatatggaacgt
tcagtgtcttcttctccgtcttcttcttcttcttcggaagacagtggtgatgtgtcgact
tctgaggacgcggtttatggcgagaagctgagtccgccgcggtttgatctgatcaatgac
agtctaagagataactacgctaagttgaacagctcctcgaagaaaccaattgggtcgcct
gcggaaaagaatgtggaagttgagactgtgagcaacaaaggtagaagcaagttggctaca
atgggggccagaaaggaggctaaagtttctctttccctcagtggagctactggtaatggt
gatttggaagttgagggtactaaaggacctacttttaaagactttggtgggattaagaaa
atattggatgaattggagatgaatgttctattccccattctcaatcctgagccgtttaag
aagattggagtgaagccaccaagtgggattctatttcatggaccacctggctgtgggaag
actaagttggccaatgccattgccaatgaagctggtgttccgttttataagatttcagcc
acagaggtgatttctggtgtttctggtgcttctgaagagaatatcagagagctcttttct
aaagcatataggactgcgccttcgattgtgtttatcgatgagattgatgcgattggttca
aagagagagaatcagcaaagagagatggagaagcggatagtaacacaattgttgacttgt
atggatggacctggtaacaaaggcgataaaaatgctcctgattctagtgctggttttgtt
cttgtcattggagctacaaataggcctgatgctcttgatcctgctttgaggagaagtgga
cgatttgaaactgagatcgctctaactgctccagatgaagacgcaagggctgagatactc
tctgttgtagcccaaaaacttagattagaaggaccctttgacaagaaaagaatagctcgt
ttaacaccgggttttgttggagctgatttggagagtgttgcttacttggctggcaggaaa
gccattaagagaatcttggattcaaggaaatctgaacagtctggggacggtgaagacgat
aaatcttggctgaggatgccctggccagaagaagagttggaaaagctctttgtcaaaatg
tctgatttcgaggaagcagtgaatctagttcaggcatctttaacaagagaaggattctct
atcgtgcctgatgtcaagtgggatgatgttggtggacttgaccatctacgacttcaattc
aaccgttatatagtgaggcctatcaaaaagcctgatatttataaggcttttggggtagac
ttagagacagggtttttgctctatggaccaccgggttgtggcaagacattgattgcaaag
gcagctgctaacgaggctggagctaatttcatgcacatcaagggtgccgaacttctaaat
aaatacgttggagaaagtgagcttgctattcgtacgttgtttcagcgagctcggacatgt
gcaccatgtgtaatcttctttgatgaggtggatgctttgacaacaagtcgtggcaaagaa
ggtgcttgggttgttgaacggcttttgaaccagtttcttgttgagctggatggtggagag
aggcgtaatgtatatgtaattggagctacaaacaggccagatgtagttgatcctgctttc
ttgagaccgggtagatttgggaatcttctttatgtacccctccccaacgcagatgagcgt
gcttcaattctaaaagctattgcaaggaagaaaccgatagatcctagtgttgatctggat
ggaattgcaaagaataactgtgaaggtttcagcggagctgatctcgcacacttggtgcaa
aaagctacattccaagcagtggaggagatgataggctccagtgagtcgtctgaagatgat
gttacagatataacgcagtgtacaatcaagacgaggcatttcgagcaagccttgtcctta
gtctcaccatctgtgaacaaacagcaaagaagacactatgacgcactatcaacaaagctt
caagaaagcgttgggaggaacactgaacaagtcaccatagggccatcttttaccctcgag
taa
DBGET
integrated database retrieval system
