Arabidopsis thaliana (thale cress): AT3G01890
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Entry
AT3G01890 CDS
T00041
Name
(RefSeq) SWIB/MDM2 domain superfamily protein
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
AT3G01890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ath03021
]
AT3G01890
03036 Chromosome and associated proteins [BR:
ath03036
]
AT3G01890
Transcription machinery [BR:
ath03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
AT3G01890
Chromosome and associated proteins [BR:
ath03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
AT3G01890
PBAF complex
AT3G01890
GBAF(ncBAF) complex
AT3G01890
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIB
SWIFT
SWIB_eIF2D
Motif
Other DBs
NCBI-GeneID:
820093
NCBI-ProteinID:
NP_566154
TAIR:
AT3G01890
UniProt:
Q147F4
LinkDB
All DBs
Position
3:310007..312073
Genome browser
AA seq
458 aa
AA seq
DB search
MSGNNELNALKGPQSSLPWPFGMASASFAPSHMAPPNFQPQFQLSQDQGISAPGRRFPHK
PPIGGPPAVPPSMELTPASRKKKHKLPDKSSLQERVAAVLPESALYTQLLEFESRVDAAL
FRKKVDIQDSLKNPPSIQKTLRIYVFNTFSNQIPGPDPPTWTLRIFGRVLDPDHTGGLVQ
NSNPLYPKFSSFFKTLKISLDQSLYPENHLIEWKRDRSPAPLEGFEIKRIGCQEFAATIL
LEMNYVPEKFKTSPALMQVLGIEVDTRPRIIAAIWHYVKVRKLQNPNDPSFFNCDAALHS
VFGEEKMKFTMLSHKISQHLSPPPPIQLVHKIKLSGNNPAISACYDVLVDIPAPVQTELS
NLLANPEKNKEIEACDEAICGAIRKIHEHRRRRAFFLGFSQSPVEFTNALMESQTKDLKL
VAGEASRNAEKEGRSEFFNQPWVEDAAIRYLNRKPAGG
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgtctgggaataacgagttgaacgcactaaaagggcctcaaagctctctgccttggcca
tttggaatggcctctgcatcgtttgctccctcccacatggcccctcctaactttcaacct
cagtttcagctctctcaagaccaagggattagtgctcctggaagaaggttcccacataaa
cctcccattggaggacctcctgctgttcctcctagtatggagttgactccagcttccagg
aaaaagaaacataagcttccagacaagtcctccttgcaggagcgcgttgctgccgtcttg
cccgagtctgctctctacacacagcttcttgagtttgagtctcgggttgatgccgctctc
ttcagaaagaaagttgacatccaagactcccttaagaaccctccttccattcagaagacc
cttaggatctacgttttcaacaccttttccaaccagatccctggtcctgaccctcccaca
tggactcttaggattttcggcagggtcctggatcctgaccacactggtggattagttcag
aattcaaacccactttatcccaagttctcgtctttcttcaaaacgttaaagatatccctg
gaccagagcctgtatcctgagaaccatctgatcgaatggaaaagggatcgatcgcctgct
cctctggaagggtttgagataaagaggatagggtgtcaggagtttgcagctactatactg
ttggagatgaattacgtccctgagaagttcaagacttctcctgctttgatgcaagttttg
ggcattgaggttgacactcgcccaagaatcattgcggcaatctggcattacgtgaaagtc
aggaaactgcaaaacccaaacgacccttctttcttcaactgtgatgctgctctccacagt
gtttttggggaagagaagatgaaattcactatgctctctcataagatatctcagcaccta
tcacctccgcctcccattcagcttgtacacaagatcaagctttcggggaacaatccagcc
atctcagcatgttacgatgtgcttgtggacataccagcaccggtccaaacggagctttcc
aatctgctcgctaatccagagaagaacaaagagattgaggcatgtgatgaagccatatgc
ggagccataaggaaaatccacgagcacagaaggagacgggcgtttttcttagggtttagc
cagtcaccggtggaattcaccaatgccttgatggaatctcagaccaaagatctgaagctt
gttgcaggagaagcaagtcgaaacgctgagaaagaaggccgatcagagttcttcaatcag
ccatgggtggaggatgctgcaatacgttacttgaaccggaagccagcaggcgggtaa
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