Arabidopsis thaliana (thale cress): AT3G02680
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Entry
AT3G02680 CDS
T00041
Symbol
NBS1
Name
(RefSeq) nijmegen breakage syndrome 1
KO
K10867
nibrin
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AT3G02680 (NBS1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ath03032
]
AT3G02680 (NBS1)
03400 DNA repair and recombination proteins [BR:
ath03400
]
AT3G02680 (NBS1)
DNA replication proteins [BR:
ath03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
AT3G02680 (NBS1)
DNA repair and recombination proteins [BR:
ath03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
AT3G02680 (NBS1)
BRCA1-C complex
AT3G02680 (NBS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FHA
BRCT
Yop-YscD_cpl
Nbs1_C
PTCB-BRCT
Cpf1_PI-like
Motif
Other DBs
NCBI-GeneID:
821254
NCBI-ProteinID:
NP_186917
TAIR:
AT3G02680
UniProt:
Q0H8D7
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All DBs
Position
3:576308..579562
Genome browser
AA seq
542 aa
AA seq
DB search
MVWGLFPVDPLSGEDKYYIFSKGIYKVGRKGCDIIINKDKGVSRIHAELTFDATTVSTSR
RNKSSSDTSSFVIRVKDCSKYGTFVKTDLGTKDKVHELSNKEKILQDGDVIAFGTGSAIY
RLSLIPLVFYLCPSSETFKVDQPVQDAVSSIGARISPTLSEECTHVLLEPRMQVNEALIN
AILAKKTIILTNWVMLLAEKSICSEIPGYSQYRPSVMVEEALVDVLELNVREKCLEGFTF
VLEPTDTYRFGCSFPSLLEVCGAETVTIEDISSMSQDSQFGEINRMICVIPKSAGDKFGR
FKHLSLLSRVNEMDLVCAVFSGNLPSTSLIPPSVVISSSCSTDETVVADSEAEEEETTSS
VHMIDATEKAETPEKPAAIVIEDSPVTILEETSNLNEFKSVNLLADTESRGHMDEKNSSD
SVTIRRDRNDEAETGKSEIIYTQDLIVRDLRSTRKVQSTGGEGVVDFKRFRKGNVTCGNS
FSSLIPFAKDPYKEYDSWDVTDFMKEEKKRKQMEAIAEDLFKTEKARKRGTAGSIRGFLS
GS
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggtttggggtctctttcccgttgatcctctttcaggtgaagataaatactatatcttt
tcaaagggtatttacaaggttggtcgaaaaggatgtgatataattatcaataaggataag
ggggtatctaggatccacgctgagttaacttttgatgcaacaactgtttcaacctctcgg
aggaacaagtcttcttcagatacatcatcctttgttatccgtgtcaaagattgttcaaag
tatgggacttttgtcaaaactgacctggggacaaaagataaagttcatgagctatctaat
aaggagaaaattctccaagatggagatgttatcgcgtttggtacaggttctgcaatttac
aggttgtccttaattccgcttgttttttacttgtgcccttcctctgagacctttaaggtg
gatcagcctgtacaagatgcagtttcatcaattggtgctcgtatttctcctacattgagt
gaggagtgcactcatgtgcttcttgagccacgtatgcaagtgaatgaagctctgatcaat
gcaattttagccaaaaaaacaatcattttgacaaactgggttatgcttctcgcagagaaa
agtatctgcagcgaaattcctggatacagccagtacagaccatcagtgatggttgaagaa
gctttggtggatgtactagaattaaacgtccgtgaaaaatgtctagaaggatttaccttt
gtcttggaaccaacagacacgtatagatttggttgcagcttcccatctttacttgaagta
tgtggtgcagagaccgttaccatagaagacattagctccatgagtcaggattctcagttt
ggagagattaatcgcatgatatgtgtcatcccaaaaagtgcaggagacaaatttggccgt
ttcaagcatctcagtttgttatctagagtgaacgagatggatttagtatgcgccgtcttt
tccggaaatctaccttcgacttcactgataccaccatccgttgtaatttcatcctcgtgc
tctacagatgagacagtggtagcggattctgaagccgaagaggaagaaacaacatcgtct
gttcatatgattgatgctactgaaaaggcagaaacgccagagaagcctgctgctattgta
atagaggatagccctgttactatattggaagaaacttcgaatttgaacgagtttaaaagc
gtgaacttattagcggatacagaaagtagaggccacatggatgaaaagaactcaagtgat
agtgtgacaatccgaagggatcggaacgatgaggctgaaactgggaaatcggagattata
tacactcaagatcttattgttagggacttgcgatcgactagaaaagttcaatcgacagga
ggggaaggagttgtggacttcaagcgattcagaaagggaaatgttacatgcggaaacagc
ttcagtagcctaataccttttgcgaaggatccatacaaagaatacgatagctgggacgtg
acagattttatgaaagaagagaagaaaaggaagcagatggaagccattgcagaggacttg
tttaaaactgaaaaggctagaaagcgtggaacggctggttccattcgcgggtttctctct
ggaagttga
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