Arabidopsis thaliana (thale cress): AT3G03300
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Entry
AT3G03300 CDS
T00041
Symbol
DCL2
Name
(RefSeq) dicer-like 2
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
ath
Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ath03036
]
AT3G03300 (DCL2)
Chromosome and associated proteins [BR:
ath03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
AT3G03300 (DCL2)
microRNA pathway
RISC loading complex
AT3G03300 (DCL2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonuclease_3
Ribonucleas_3_3
Dicer_dimer
Helicase_C
PAZ
DEAD
ResIII
Cas3-like_C_2
dsrm
SNF2-rel_dom
AAA_22
Motif
Other DBs
NCBI-GeneID:
821300
NCBI-ProteinID:
NP_566199
TAIR:
AT3G03300
UniProt:
Q3EBC8
LinkDB
All DBs
Position
3:complement(767880..776214)
Genome browser
AA seq
1388 aa
AA seq
DB search
MTMDADAMETETTDQVSASPLHFARSYQVEALEKAIKQNTIVFLETGSGKTLIAIMLLRS
YAYLFRKPSPCFCVFLVPQVVLVTQQAEALKMHTDLKVGMYWGDMGVDFWDSSTWKQEVD
KYEVLVMTPAILLDALRHSFLSLSMIKVLIVDECHHAGGKHPYACIMREFYHKELNSGTS
NVPRIFGMTASLVKTKGENLDSYWKKIHELETLMNSKVYTCENESVLAGFVPFSTPSFKY
YQHIKIPSPKRASLVEKLERLTIKHRLSLGTLDLNSSTVDSVEKRLLRISSTLTYCLDDL
GILLAQKAAQSLSASQNDSFLWGELNMFSVALVKKFCSDASQEFLAEIPQGLNWSVANIN
GNAEAGLLTLKTVCLIETLLGYSSLENIRCIIFVDRVITAIVLESLLAEILPNCNNWKTK
YVAGNNSGLQNQTRKKQNEIVEDFRRGLVNIIVATSILEEGLDVQSCNLVIRFDPASNIC
SFIQSRGRARMQNSDYLMMVESGDLLTQSRLMKYLSGGKRMREESLDHSLVPCPPLPDDS
DEPLFRVESTGATVTLSSSVSLIYHYCSRLPSDEYFKPAPRFDVNKDQGSCTLYLPKSCP
VKEVKAEANNKVLKQAVCLKACIQLHKVGALSDHLVPDMVVAETVSQKLEKIQYNTEQPC
YFPPELVSQFSAQPETTYHFYLIRMKPNSPRNFHLNDVLLGTRVVLEDDIGNTSFRLEDH
RGTIAVTLSYVGAFHLTQEEVLFCRRFQITLFRVLLDHSVENLMEALNGLHLRDGVALDY
LLVPSTHSHETSLIDWEVIRSVNLTSHEVLEKHENCSTNGASRILHTKDGLFCTCVVQNA
LVYTPHNGYVYCTKGVLNNLNGNSLLTKRNSGDQTYIEYYEERHGIQLNFVDEPLLNGRH
IFTLHSYLHMAKKKKEKEHDREFVELPPELCHVILSPISVDMIYSYTFIPSVMQRIESLL
IAYNLKKSIPKVNIPTIKVLEAITTKKCEDQFHLESLETLGDSFLKYAVCQQLFQHCHTH
HEGLLSTKKDGMISNVMLCQFGCQQKLQGFIRDECFEPKGWMVPGQSSAAYSLVNDTLPE
SRNIYVASRRNLKRKSVADVVESLIGAYLSEGGELAALMFMNWVGIKVDFTTTKIQRDSP
IQAEKLVNVGYMESLLNYSFEDKSLLVEALTHGSYMMPEIPRCYQRLEFLGDSVLDYLIT
KHLYDKYPCLSPGLLTDMRSASVNNECYALVAVKANLHKHILYASHHLHKHISRTVSEFE
QSSLQSTFGWESDISFPKVLGDVIESLAGAIFVDSGYNKEVVFASIKPLLGCMITPETVK
LHPVRELTELCQKWQFELSKAKDFDSFTVEVKAKEMSFAHTAKASDKKMAKKLAYKEVLN
LLKNSLDY
NT seq
4167 nt
NT seq
+upstream
nt +downstream
nt
atgaccatggatgctgatgcgatggaaactgagaccactgatcaagtctctgcttctcct
ctacattttgccagaagttatcaggtagaggcacttgagaaagctatcaagcagaacact
attgtcttcttggagactggttctggcaagacccttattgctattatgcttcttcgtagc
tatgcctaccttttccgcaagccttcaccatgcttctgtgtcttcttggttcctcaagtg
gttcttgtcactcagcaagcagaagccctgaagatgcatactgatctaaaagttggtatg
tattggggagacatgggggtggacttttgggattcttcaacatggaaacaagaagttgat
aaatatgaggttctggtgatgacccctgccattttgctcgacgcgttgaggcatagtttt
ctgagcttgagcatgatcaaggttctaatagttgatgagtgtcatcatgcagggggaaag
cacccttatgcttgtatcatgagggagttctatcataaggagttaaattctggaacttcc
aatgttccacggatatttgggatgactgcttcacttgtgaaaacaaagggtgaaaatctg
gatagctactggaaaaaaattcatgaactcgaaactctaatgaattcaaaggtctatacc
tgtgagaatgagtctgtgctggctgggtttgtccccttttctacaccaagcttcaagtat
taccagcacataaaaataccaagtcccaaacgagcaagcttggtagagaagctagaaaga
ctaacgataaagcatcgcttatcccttggaaccttggatctcaactcctctactgttgat
tctgtagagaagagactgttgaggataagttcaactctaacatattgtttggatgatctc
ggaattttgctggcccagaaggctgctcagtcattgtcagccagtcagaatgactctttc
ttgtggggcgaactaaatatgtttagcgtggccttggtaaaaaaattctgctctgatgct
tcacaggagtttttggctgagatacctcaaggtcttaattggagtgttgcaaacataaat
ggaaatgcggaggcaggtctcctaactttaaaaactgtctgcctcattgagactcttctt
ggttatagctccttggagaacatacggtgcatcatttttgtggatagggtgataacagcc
atcgttctggaatcccttttggctgagattcttccaaactgtaataactggaaaaccaag
tacgttgcaggaaataactctggtctgcaaaatcaaactcggaagaagcaaaatgaaatt
gtggaagacttccggagaggcttggttaacatcattgtagcaacatctattctagaggag
ggtctagatgttcaaagttgcaacctggttatcagatttgaccctgcatccaacatttgc
agtttcatacagtctcgtgggcgtgctagaatgcaaaattcagattatttgatgatggtg
gaaagcggagatctgttaacacaatctcgattaatgaaatatctttctggtgggaaaaga
atgcgcgaagagtctttggatcattctcttgttccctgtccacctcttccagatgattca
gatgaaccactcttccgtgtcgaaagtactggagcaactgtaactcttagctcaagcgtc
agcttaatatatcattactgctcaaggcttccttcagatgagtacttcaaaccagcccct
agatttgatgtaaacaaggatcaggggagttgcaccctttaccttcctaagagttgccca
gtaaaagaagttaaagctgaagcaaataataaagtgttaaaacaagctgtctgtcttaaa
gcttgcattcaactgcacaaagttggagctctaagtgatcatcttgtgcctgacatggtt
gtggcggaaactgtctcacaaaaactcgagaaaatccaatataacacagagcagccatgt
tacttccccccagagctagtctcccagttttcagcacagccggagacaacataccacttc
tacttaataagaatgaagccaaactctccaagaaattttcatttaaacgatgttttacta
ggcaccagagttgtgcttgaagatgacattgggaacacaagcttccggttggaagatcat
aggggtacaatagctgtgacattgagttatgtgggagcttttcaccttacacaagaagag
gtccttttctgtagaagatttcagataactctattccgagttcttttagatcacagtgtg
gaaaatttgatggaggcattgaatggattgcatctcagagatggggtggcacttgattat
ctactagttccatccactcattcacatgaaacatctcttattgattgggaagtgatcaga
tccgtgaatctaacttctcatgaggttttggaaaaacacgaaaattgttctaccaacggt
gcttctcgcattctacacacaaaagacggcttgttttgtacttgtgtcgtacaaaatgca
ttggtttacacaccacataatggatacgtctactgcacaaaaggtgttctcaacaatcta
aacggaaattcattattgaccaagagaaattctggcgatcagacttacattgagtactac
gaggaaaggcatgggattcaattaaattttgtggatgaacctcttctaaatggaagacac
attttcacgttgcatagttatcttcacatggccaagaagaagaaggagaaagagcatgac
agggaatttgttgaactacctcctgagctttgtcatgtcattttgtccccaatatcagtt
gatatgatctattcatatacttttatcccatctgttatgcaacgcattgaatctttgctt
atagcatacaacctgaagaaaagcatcccaaaagtcaatattccaaccattaaggttttg
gaagctattacgacaaagaagtgcgaagatcagttccacttggaatcactagaaactctt
ggtgactcttttctgaaatatgctgtttgtcagcaactattccaacactgtcatactcac
catgagggtcttcttagcacgaagaaagatggaatgatttcaaatgtcatgctctgccaa
tttggatgtcagcagaaacttcagggatttatccgcgatgagtgttttgaacccaaaggt
tggatggttccaggtcaatcatctgcagcttattcacttgtaaacgatactctacccgag
tctagaaacatatacgttgctagtaggaggaatctgaaacgcaagagtgtggccgatgtt
gtagaatcattaattggagcatatctcagcgagggaggtgaacttgcagctttgatgttc
atgaattgggttggaataaaggtcgactttacaactacgaagatccagagagattcccca
atacaagcagagaagcttgtgaatgtaggttatatggagtcgctgttgaattacagtttt
gaggataagtctcttctagttgaagcattgactcatggttcatacatgatgcctgaaatt
ccaagatgctatcagcggttggagttcctcggtgactctgtattggattatctcataacc
aagcatctatacgacaaatatccttgtctgtcccctggactattaaccgacatgcgatca
gcttctgttaacaatgaatgttatgccctagtggcggtgaaagcaaacctgcacaaacac
atcctgtacgcctctcatcatctccataagcacatctctagaactgtcagtgagtttgaa
cagtcttctttgcaatccactttcggatgggaatccgatatatcttttccaaaggttctt
ggagatgtgatagaatctctagcaggcgcgatatttgttgactcaggttacaacaaggaa
gtagtgtttgcaagtattaaaccacttttgggttgtatgataactccagagactgtcaag
ttgcatcctgtgagagagttgacagaattatgtcagaagtggcagttcgagttgagtaaa
gctaaagatttcgattctttcacggttgaggtgaaagctaaggagatgagttttgctcac
acagcaaaggcctctgataagaaaatggccaagaaattggcttacaaagaagtcttgaac
ttacttaagaacagcctggactactaa
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integrated database retrieval system
