Arabidopsis thaliana (thale cress): AT3G03710
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Entry
AT3G03710 CDS
T00041
Symbol
RIF10
Name
(RefSeq) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AT3G03710 (RIF10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ath03019
]
AT3G03710 (RIF10)
03016 Transfer RNA biogenesis [BR:
ath03016
]
AT3G03710 (RIF10)
Enzymes [BR:
ath01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
AT3G03710 (RIF10)
Messenger RNA biogenesis [BR:
ath03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
AT3G03710 (RIF10)
Transfer RNA biogenesis [BR:
ath03016
]
Prokaryotic type
tRNA degradation factors
AT3G03710 (RIF10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
OB_RRP5_4th
DUF6919
Motif
Other DBs
NCBI-GeneID:
821181
NCBI-ProteinID:
NP_187021
TAIR:
AT3G03710
UniProt:
Q8GZQ3
A0A654F3U1
LinkDB
All DBs
Position
3:919362..925372
Genome browser
AA seq
922 aa
AA seq
DB search
MLTSPSNALHSSTPQFWPLRRSKLCRSRNFPRFHSGERSSGGGGKLCSLSLLSGSGAGKF
SVRALVRPDDTDDADSVGDGSLAFPNHVSVKIPFGNREILVETGLMGRQASSAVTVTDGE
TIVYTSVCLADVPSEPSDFLPLYVHYQERFSAVGRTSGGFFKREGRTKDHEVLICRLIDR
PLRPTMPKGFYNETQILSWVLSYDGLHAPDALAVTSAGIAVALSEVPNAKAIAGVRVGLI
GGEFIVNPTVKEMEESQLDLFLAGTDTAILTIEGYSNFLPEEMLLQAVKVGQDAVQATCI
AIEVLAKKYGKPKMLDAIRLPPPELYKHVKELAGEELTKALQIKSKISRRKAISSLEEKV
LTILTEKGYVIDEVAFGTIEAQPDLLEDEDEDEEVVPEGEVDQGDVHIRPIPRKPIPLLF
SEVDVKLVFKEVSSKLLRRRIVEGGKRSDGRTLDEIRPINSRCGLLPRAHGSTLFTRGET
QALAVVTLGDKQMAQRIDNLEGSDEYKRFYLQYTFPPSSVGEVGRIGAPSRREIGHGTLA
ERALETILPSDDDFPYTIRVESTVIESNGSSSMASVCGGCLALQDAGVPVKCSVAGIAMG
MVWDTEEFGGDGSPLILSDITGAEDASGDMDFKVAGNEDGVTAFQMDIKVGGITLEIMEK
ALIQAKAGRRHILAEMAKCSPPPTLSLSKYAPLILIMKVHPSKVYSLIGSGGKKVKSIIE
ESGVEAIDMQDDGTVKIMAIDVASLERAKAIISGLTMVPSVGDIYRNCEIKSMAPYGAFV
EIAPGREGLCHISELSAEWLAKPEDAYKVGDRIDVKLIEVNEKGQLRLSVRALLPESETD
KDSQKQQPAGDSTKDKSSQRKYVNTSSKDRAAAGASKVSSGDELVLKKKDVRRATGGSSD
KTMNSNSSTNEESLVNGEATIS
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atgttgacgagtcccagtaacgcacttcacagtagtactccacaattctggccacttcgc
cggagcaagctttgccgttcccggaatttccctcgttttcactccggcgaacgcagcagc
ggcggaggaggaaaattgtgctcgctctctcttctctccggaagtggcgccggtaaattc
agtgtcagagctctagttaggcctgatgataccgacgacgctgactccgtcggcgatggg
tctctggcttttcctaaccacgtttctgtcaaaattccattcggaaatagagagatttta
gttgagactggtctcatggggagacaagcaagttctgcagtcacggtcacagatggagaa
actattgtctacacatccgtttgtctagctgatgttccgagtgagccatcagattttctt
cccctttatgttcactatcaggagcgattctcagctgtaggtcgaactagtggtggattt
tttaagcgagaagggagaaccaaagatcacgaggttctgatttgtaggttgatcgataga
cctctacgccccactatgcccaaaggtttctacaatgaaactcagattttatcctgggtt
ttgagctacgatggattacacgcacctgatgctttagctgttacatctgctggaattgct
gtagctctttcagaagtaccaaatgcgaaagcgattgcaggagttcgggttggtcttatt
gggggtgaattcattgtcaatccaaccgtgaaggagatggaagaatcacagctagatttg
tttctagctggaacagatactgcaattctaacgatagagggatacagtaattttcttcct
gaggaaatgcttctccaagctgttaaagttggacaggatgctgtacaggctacatgcatt
gctattgaagttttagcaaagaaatatggaaagcctaaaatgcttgacgctatcagatta
ccacctccagagctatacaagcatgtgaaagaacttgctggtgaggaattgacaaaagcg
ttacaaattaagagtaaaatatcgagaaggaaagccatatcgtccctggaagaaaaggtc
ttgacaatactgacagagaagggatatgttattgatgaggtagcttttggaaccatagaa
gcacaaccggatctgttggaggatgaagacgaggatgaggaagttgttcctgaaggtgag
gtggaccaaggcgatgttcacattagacccatccctcggaaacctattcctttactattt
tctgaagtagatgtcaagctagtcttcaaagaagtatcgtcgaagcttctacgtaggcga
attgttgagggaggtaaaagaagtgatggtcggactctggatgagattcgtccaattaat
tcaagatgtggactgcttcccagggcacatggaagtactctgttcacacgtggggaaaca
caggcactggcagttgttacgcttggtgataaacaaatggcgcagagaattgacaacctt
gagggttctgatgaatacaagaggttctatcttcagtacacttttcctccatcgtctgtt
ggtgaagttggacgaattggtgcacccagtagaagagaaataggtcatgggacactagca
gagcgagcattggagaccattctacctagtgatgatgactttccttacacaatacgtgtt
gaaagtacagtaattgaaagcaatggttcttcaagtatggcatctgtttgtggcggttgc
ttggctttgcaagatgctggagttccagtcaaatgttctgttgctgggatagcaatggga
atggtttgggatactgaagaatttggaggtgatggatctccccttatcctttctgacatc
actggagctgaagatgcatctggtgatatggactttaaggttgctgggaatgaagatggc
gttaccgcctttcagatggacatcaaggtaggaggaattactttagagataatggaaaag
gctctaatacaggcaaaagctgggcgtcgccatattcttgctgaaatggcaaagtgctca
ccgcctcccacgctaagcctctcaaaatatgctccattgatacttattatgaaggttcat
ccaagcaaagtatactctcttattggttctggaggtaagaaagtaaagagcatcattgaa
gaatctggagttgaggccattgacatgcaagatgatggaactgtcaaaattatggcaatt
gatgtagcgagtctagaaagggcgaaagcgattattagtggattgacaatggttccctct
gttggtgatatctacaggaattgtgaaatcaagtcaatggctccttatggtgcatttgta
gagatagcgcctgggcgggaaggtctttgccatatcagtgagctgagtgctgaatggctt
gcaaaaccagaggatgcctataaagtaggagaccgcattgacgtcaaattaatagaggta
aatgaaaagggtcagcttcgacttagtgtacgggctttacttcccgaatcagagacagac
aaagacagtcagaaacaacagccggcaggtgattctaccaaagacaagagttcgcaaagg
aaatatgtaaatacttcgtcaaaggaccgtgcagctgcaggagcatcaaaggtttcatct
ggggatgaacttgtcctgaagaagaaagatgtaaggagagcaactggtggtagtagtgac
aagacaatgaatagcaatagcagtaccaacgaagaaagtttagtcaacggtgaagctaca
atcagctag
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