KEGG   Arabidopsis thaliana (thale cress): AT3G05090
Entry
AT3G05090         CDS       T00041                                 
Symbol
LRS1
Name
(RefSeq) Transducin/WD40 repeat-like superfamily protein
  KO
K15361  WD repeat-containing protein 48
Organism
ath  Arabidopsis thaliana (thale cress)
Pathway
ath03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:ath00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    AT3G05090 (LRS1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ath03400]
    AT3G05090 (LRS1)
DNA repair and recombination proteins [BR:ath03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     AT3G05090 (LRS1)
SSDB
Motif
Pfam: WD40 WD40_Prp19 DUF3337 WD40_WDHD1_1st WD40_CDC20-Fz WDR55 Beta-prop_TEP1_2nd EIF3I Beta-prop_EML Beta-prop_EML_2 Beta-prop_WDR75_1st Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd NBCH_WD40 Beta-prop_SPT8 Beta-prop_SCAP Beta-prop_TEP1_C Beta-prop_IFT122_1st Beta-prop_WDR90_POC16_2nd Beta-prop_EIPR1 Beta-prop_DCAF4 Beta-prop_RIG_2nd WD40_MABP1-WDR62_1st WD40_RFWD3 RAWUL KNTC1_N
Other DBs
NCBI-GeneID: 819671
NCBI-ProteinID: NP_001325515
TAIR: AT3G05090
UniProt: A0A384LLQ1 Q93ZS6
LinkDB
Position
3:complement(1417893..1423673)
AA seq 753 aa
MHRVGSAGSNGGSVRTRKEKKLTYVLNDANDTKHCAGINCLDVLKSSVSNDQSYLFTGSR
DGTLKRWAFDEDATFCSATFESHVDWVNDAALAGESTLVSCSSDTTVKTWDGLSDGVCTR
TLRQHSDYVTCLAVAAKNNNVVASGGLGGEVFIWDIEAALSPVTKPNDANEDSSSNGANG
PVTSLRTVGSSNNISVQSSPSHGYTPTIAKGHKESVYALAMNDTGTMLVSGGTEKVLRVW
DPRTGSKSMKLRGHTDNVRVLLLDSTGRFCLSGSSDSMIRLWDLGQQRCLHTYAVHTDSV
WALACNPSFSHVYSGGRDQCLYLTDLATRESVLLCTKEHPIQQLALQDNSIWVATTDSSV
ERWPAEVQSPKTVFQRGGSFLAGNLSFNRARVSLEGLNPAPAYKEPSITVPGTHPIVQHE
ILNNKRQILTKDAAGSVKLWDITRGVVVEDYGKISFEEKKEELFEMVSIPSWFTVDTRLG
CLSVHLETPQCFSAEMYSADLKVSGRPEDDKINLARETLKGLLGHWLAKKKHKPKPQVLA
SGDTLSVKDTKKNLSASKTEESSAASDPVYPPFEFSSVSPPSIITEGSQGGPWRKKITEF
TGTEDEKDFPLWCLDAVLNNRLPPRENTKLSFFLHPCEGSSVQVVTLGKLSAPRILRVHK
VTNYVVEKMVLDNPLDSLAIDAASVSGGQPQPLFSGNGLLQSGLKPWQKLRPSIEILCNS
QVLSPDMSLATVRAYVWKKPEDLILNYRVAIAR
NT seq 2262 nt   +upstreamnt  +downstreamnt
atgcaccgggttggaagtgccggcagtaatggcggttctgttcgcactcgcaaagagaaa
aagcttacttatgtgttaaatgatgccaacgatacaaagcattgtgctggcataaattgc
ttggatgtgttgaagtcgtctgtttctaatgatcaaagctacctcttcactggaagtcgt
gatggtacactcaagagatgggcatttgacgaggatgcgaccttctgctcagctacattt
gagtctcatgttgactgggtgaacgacgctgctctggctggtgagagcactcttgtttct
tgttcttcagacactacggtcaagacatgggacggtttatcagatggagtctgtacgagg
actctccgtcagcattctgactatgttacttgtttggcagttgcggcaaaaaataataat
gttgttgcatctggtggccttggtggggaggtttttatatgggatattgaagctgctttg
tcaccagttaccaaacctaatgacgctaatgaagatagttcttcaaatggtgcaaatggt
cctgttacaagtttaagaactgttggttcaagcaacaatatctctgtgcagtcatctcca
tctcatgggtacacaccaacaattgcgaaaggccataaggagtctgtgtatgctttggcg
atgaatgataccggaacgatgctcgtttctggtggaacagaaaaggttttacgtgtctgg
gaccctagaaccggttcaaagagtatgaagctgagagggcatacagataatgttagagtg
ctgcttctggactcaactggcaggttttgcttgtctgggtcgtctgattctatgataaga
ctatgggatctaggtcagcagcgatgtcttcatacctatgcggtgcatacagattctgtt
tgggcgcttgcatgcaacccatcatttagtcatgtttatagcggtggaagagaccaatgt
ttatacttgacagacttggcaacaagggagagtgttttgctgtgcactaaggaacatcca
attcaacaattagcgttgcaagataatagtatatgggttgcaactacagactcctctgta
gagagatggcctgccgaagtacagagtcctaaaacggtctttcaacgaggtggctccttc
ttggctgggaatttgtcttttaatagggcgagggtatctttggaaggactaaatccagcc
cctgcatacaaggagccgtcaataactgtcccaggaactcacccgattgtgcaacatgag
attttgaataataaaaggcaaattttaaccaaggacgcagctggctcagtgaaactatgg
gatataactaggggtgttgtggtagaggactatggaaagatttcatttgaagagaagaaa
gaagaactgtttgagatggtaagcattccatcgtggtttactgtggatacacgacttgga
tgcttatctgtacatttggagactccacaatgcttctctgctgaaatgtattcagcagac
cttaaagtttctgggcgacctgaagatgataagattaatctagctcgtgaaacactgaaa
ggcctgctgggtcactggctggcaaagaagaaacacaaaccaaaaccccaagttcttgcc
tctggagatactttatctgtaaaagataccaaaaaaaatctaagtgcatcaaaaactgaa
gagagtagtgctgcaagtgatccggtgtatcctccattcgagttttcttccgtctcccct
ccttccatcataactgagggttctcaaggaggaccatggaggaagaagataaccgagttt
actggaactgaagatgagaaggacttcccattgtggtgcttggacgctgtcttgaacaat
cggcttccacctagagaaaatacaaaattaagcttcttcctgcatccatgtgaaggttca
tcggtgcaggtggttacactagggaaacttagtgcaccccggatcttaagagttcacaag
gttaccaattacgttgtggaaaagatggtccttgacaatccgttggatagtctagctatt
gatgcagcaagtgtttcaggaggacaacctcagccactgttttcaggaaatggattgtta
cagtctggattaaagccttggcagaaacttagaccttccattgagatcttatgtaatagc
caggtcttatctccagatatgagtttagcaactgtacgggcatatgtatggaagaaacct
gaggatctgattctcaactacagagtggctatagctagataa

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