Arabidopsis thaliana (thale cress): AT3G05580
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Entry
AT3G05580 CDS
T00041
Symbol
TOPP9
Name
(RefSeq) Calcineurin-like metallo-phosphoesterase superfamily protein
KO
K06269
serine/threonine-protein phosphatase PP1 catalytic subunit [EC:
3.1.3.16
]
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
AT3G05580 (TOPP9)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ath01009
]
AT3G05580 (TOPP9)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ath03021
]
AT3G05580 (TOPP9)
03019 Messenger RNA biogenesis [BR:
ath03019
]
AT3G05580 (TOPP9)
03041 Spliceosome [BR:
ath03041
]
AT3G05580 (TOPP9)
Enzymes [BR:
ath01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
AT3G05580 (TOPP9)
Protein phosphatases and associated proteins [BR:
ath01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
Catalytic subunits
AT3G05580 (TOPP9)
Transcription machinery [BR:
ath03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
AT3G05580 (TOPP9)
Messenger RNA biogenesis [BR:
ath03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
AT3G05580 (TOPP9)
Spliceosome [BR:
ath03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
AT3G05580 (TOPP9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
STPPase_N
Motif
Other DBs
NCBI-GeneID:
819724
NCBI-ProteinID:
NP_187209
TAIR:
AT3G05580
UniProt:
Q9M9W3
A0A178VKY6
LinkDB
All DBs
Position
3:complement(1617599..1620702)
Genome browser
AA seq
318 aa
AA seq
DB search
MMTSMEGMMEMGVLDDIIRRLLEGKGGKQVQLSEVEIRQLCVNARQIFLSQPNLLELHAP
IRICGDIHGQYQDLLRLFEYGGYPPSANYLFLGDYVDRGKQSLETICLLLAYKIRYPSKI
FLLRGNHEDAKINRIYGFYDECKRRFNVRLWKIFTDCFNCLPVAALIDEKILCMHGGLSP
ELENLGQIREIQRPTEIPDNGLLCDLLWSDPDQKNEGWTDSDRGISCTFGADVVADFLDK
NDLDLICRGHQVVEDGYEFFAKRRLVTIFSAPNYGGEFDNAGALLSVDQSLVCSFEILKP
APASSTNPLKKVPKMGKS
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgatgacgagtatggaagggatgatggagatgggtgtattggatgatattataaggaga
ttgttggaaggtaaaggaggtaaacaggttcagctttcggaggtcgagatccgtcaactt
tgcgttaacgccagacaaatcttcctttctcagcctaatcttctcgagcttcatgccccc
attcgcatctgcggtgatatccatggacagtaccaagatcttctgaggctattcgaatac
ggaggctatcctccttcagcgaactatctcttcctcggcgattacgttgatagaggcaag
caaagtcttgaaacaatatgtttactcttggcttacaaaatccggtacccatccaagata
tttctcttgagaggaaaccatgaagatgctaagatcaacaggatttacgggttctatgac
gaatgcaaacggaggtttaatgtacggctttggaagatattcaccgattgcttcaactgt
ttgccggtagctgctctcattgacgagaagatcctatgtatgcatggtggattgtcaccg
gaattggaaaacttggggcagattcgggagattcaaaggcctacagagattccagacaat
ggtcttctttgtgatttactttggtctgatcctgatcagaagaatgaagggtggactgat
agcgatcgaggtatctcctgcacgtttggagccgatgtagtcgctgactttttggataag
aatgatctcgatctcatttgcagaggccatcaggtagtggaagatgggtatgagtttttc
gcaaaacggaggttagtcacaatattctcagctccaaactatggaggagagtttgacaat
gccggtgcattattgagcgtggatcaatctctcgtttgctcctttgagattctgaaaccg
gctccagcttctagcactaatcctctcaagaaggtaccgaaaatggggaagtcttga
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integrated database retrieval system
