Arabidopsis thaliana (thale cress): AT3G05970
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Entry
AT3G05970 CDS
T00041
Symbol
LACS6
Name
(RefSeq) long-chain acyl-CoA synthetase 6
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath00061
Fatty acid biosynthesis
ath00071
Fatty acid degradation
ath01100
Metabolic pathways
ath01212
Fatty acid metabolism
ath04146
Peroxisome
Module
ath_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
AT3G05970 (LACS6)
00071 Fatty acid degradation
AT3G05970 (LACS6)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
AT3G05970 (LACS6)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ath01004
]
AT3G05970 (LACS6)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ath04147
]
AT3G05970 (LACS6)
Enzymes [BR:
ath01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
AT3G05970 (LACS6)
Lipid biosynthesis proteins [BR:
ath01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
AT3G05970 (LACS6)
Exosome [BR:
ath04147
]
Exosomal proteins
Exosomal proteins of breast milk
AT3G05970 (LACS6)
Exosomal proteins of breast cancer cells
AT3G05970 (LACS6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Apo-VLDL-II
Motif
Other DBs
NCBI-GeneID:
819767
NCBI-ProteinID:
NP_566265
TAIR:
AT3G05970
UniProt:
Q8LPS1
A0A5S9X9I0
LinkDB
All DBs
Position
3:complement(1786279..1791887)
Genome browser
AA seq
701 aa
AA seq
DB search
MDSSSSSSSAAARRRINAIHSHLVTSSRSSPLLRSNPTAGEFCLDNGYSVVLPEKLNTGS
WNVYRSAKSPFKLVSRFPDHPDIATLHDNFEHAVHDFRDYKYLGTRVRVDGTVGDYKWMT
YGEAGTARTALGSGLVHHGIPMGSSVGIYFINRPEWLIVDHACSSYSYVSVPLYDTLGPD
AVKFIVNHATVQAIFCVAETLNSLLSCLSEMPSVRLVVVVGGLIESLPSLPSSSGVKVVS
YSVLLNQGRSNPQRFFPPKPDDVATICYTSGTTGTPKGVVLTHANLIANVAGSSFSVKFF
SSDVYISYLPLAHIYERANQILTVYFGVAVGFYQGDNMKLLDDLAALRPTVFSSVPRLYN
RIYAGIINAVKTSGGLKERLFNAAYNAKKQALLNGKSASPIWDRLVFNKIKDRLGGRVRF
MTSGASPLSPEVMEFLKVCFGGRVTEGYGMTETSCVISGMDEGDNLTGHVGSPNPACEVK
LVDVPEMNYTSADQPHPRGEICVRGPIIFTGYYKDEIQTKEVIDEDGWLHTGDIGLWLPG
GRLKIIDRKKNIFKLAQGEYIAPEKIENVYAKCKFVGQCFIYGDSFNSSLVAVVSVDPDV
LKSWAASEGIKGGDLRELCNNPRVKAAVLSDMDTVGREAQLRGFEFAKAVTLVLEPFTLE
NGLLTPTFKIKRPQAKEYFAEAITNMYKELGASDPSANRGL
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atggattcttcttcttcgtcttcctccgccgccgcacgccgccgtatcaacgctatccac
tctcacctcgtcacctcttctcgctcttcccctctcctccgctccaatcccaccgccggc
gagttctgtcttgataatggctatagtgttgttcttcccgagaaactgaatactggcagt
tggaacgtctacagatctgcaaaatctccgttcaagctcgttagcagattcccagatcat
cctgacatcgctactctccatgacaattttgagcatgctgttcatgattttcgagattac
aagtatttaggaactcgtgttcgtgtcgacggaactgttggagactacaaatggatgaca
tatggagaagctggtacagcaagaactgctttaggttctggtttggttcatcacggaatc
cccatgggatcttctgttggaatttacttcatcaatcgcccagagtggctcattgttgat
catgcttgttcttcttattcttatgtgtctgttcctttgtatgatactcttggtcctgat
gctgtgaaatttattgtcaatcatgcaactgtgcaagccatattttgtgtggcagagact
ttaaactctttacttagctgtttgtctgagatgccaagtgtacgcctggtggtggttgtt
ggagggttaattgaatctttaccctcgcttccctcatcatcaggagtgaaagttgtatcc
tattcggtgttactgaatcagggtcgtagtaaccctcagcgattttttccaccaaaaccc
gatgatgttgcaaccatatgctatacaagcggaacaactgggacacccaagggagtcgta
ttaactcatgcaaacttgattgccaatgttgctggctccagctttagtgtgaagtttttc
tcttcagatgtttacatttcgtatcttccacttgctcacatttacgaacgagctaatcag
atcctaacagtgtactttggagttgctgttggattctaccaaggggacaatatgaaacta
ctggatgatttggctgctctgagacctactgtatttagcagtgtccctcgattatacaat
agaatatatgctggtatcattaatgcagtaaaaacctctggtggtctgaaagagagactc
ttcaatgctgcctataatgcaaagaagcaggctctcttgaatggaaagagtgcttctccc
atatgggacaggttggtatttaataaaataaaggacagacttggagggcgggttcgtttt
atgacgtctggtgcttcacctctctctcctgaagtgatggaatttttgaaagtatgcttt
ggaggaagggtaacagagggatatggaatgactgaaacatcttgtgttataagtggaatg
gacgagggtgataacctcactggacatgttggctctcctaatccagcttgtgaagtaaag
cttgtggatgtcccagaaatgaactatacatcagcggatcagccccatccccgtggcgaa
atatgtgttaggggtcctatcatttttacaggctattacaaagatgaaattcaaacgaaa
gaggtgattgatgaagatggatggcttcacactggagatataggtctgtggctgccggga
ggacgtctaaaaattattgacagaaagaagaacatcttcaaattggcgcagggggagtat
atagctccagagaaaattgaaaacgtctatgccaaatgcaaatttgtgggccagtgcttc
atatatggtgatagctttaattcatcattggtagctgttgtatcggttgatccagatgtg
ctgaaaagctgggcagcttcagaaggcattaagggaggagatctgagagaattgtgtaat
aatccgagagtgaaagcagcagtactatctgacatggacactgttggaagagaagctcag
ttgagaggcttcgagtttgcaaaggctgtgacattggtgctggaaccatttactctggaa
aatggcttgttgactccgacgttcaagattaagagaccacaagcaaaggaatatttcgca
gaagcaataacaaacatgtacaaggagcttggtgcttctgatccctctgctaatagaggt
ttgtga
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