Arabidopsis thaliana (thale cress): AT3G08530
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Entry
AT3G08530 CDS
T00041
Name
(RefSeq) Clathrin, heavy chain
KO
K04646
clathrin heavy chain
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath04142
Lysosome
ath04144
Endocytosis
ath05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
AT3G08530
04142 Lysosome
AT3G08530
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
AT3G08530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ath04131
]
AT3G08530
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ath04147
]
AT3G08530
Membrane trafficking [BR:
ath04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
AT3G08530
Exosome [BR:
ath04147
]
Exosomal proteins
Proteins found in most exosomes
AT3G08530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
Motif
Other DBs
NCBI-GeneID:
820001
NCBI-ProteinID:
NP_187466
TAIR:
AT3G08530
UniProt:
Q0WLB5
A0A178VB65
LinkDB
All DBs
Position
3:complement(2586804..2595654)
Genome browser
AA seq
1703 aa
AA seq
DB search
MAAANAPITMKEVLTLPSIGINQQFITFTNVTMESDKYICVRETSPQNSVVIIDMNMPMQ
PLRRPITADSALMNPNSKILALKAQVPGTTQDHLQIFNIEAKAKLKSHQMPEQVVFWKWI
TPKMLGLVTQNSVYHWSIEGDSEPVKMFDRTANLANNQIINYKCSPNEKWLVLIGIAPGS
PERQQLVKGNMQLFSVDQQRSQALEAHAASFAQFKVPGNENPSILISFASKSFNAGQITS
KLHVIELGAQPGKPSFTKKQADLFFPPDFADDFPVAMQVSHKFNLIYVITKLGLLFVYDL
ETASAIYRNRISPDPIFLTSEASSVGGFYAINRRGQVLLATVNEATIIPFISGQLNNLEL
AVNLAKRGNLPGAENLVVQRFQELFAQTKYKEAAELAAESPQGILRTPDTVAKFQSVPVQ
AGQTPPLLQYFGTLLTRGKLNSYESLELSRLVVNQNKKNLLENWLAEDKLECSEELGDLV
KTVDNDLALKIYIKARATPKVVAAFAERREFDKILIYSKQVGYTPDYLFLLQTILRTDPQ
GAVNFALMMSQMEGGSPVDYNTITDLFLQRNLIREATSFLLDVLKPNLPEHAFLQTKVLE
INLVTFPNVADAVLANGMFTHYDRPRIAQLCEKAGLYIQSLKHYSELPDIKRVIVNTHAI
EPQALVEFFGTLSSEWAMECMKDLLLVNLRGNLQIIVQACKEYCEQLGVDACIKLFEQFK
SYEGLYFFLGSYLSMSEDPEIHFKYIEAAAKTGQIKEVERVTRESNFYDAEKTKNFLMEA
KLPDARPLINVCDRFSFVPDLTHYLYTNNMLRYIEGYVQKVNPGNAPLVVGQLLDDECPE
DFIKGLILSVRSLLPVEPLVEECEKRNRLRLLTQFLEHLVSEGSQDVHVHNALGKIIIDS
NNNPEHFLTTNPYYDSKVVGKYCEKRDPTLAVVAYRRGQCDEELINVTNKNSLFKLQARY
VVERMDGDLWDKVLDENNDYRRQLIDQVVSTALPESKSPEQVSAAVKAFMTADLPHELIE
LLEKIVLQNSAFSGNFNLQNLLILTAIKADPSRVMDYINRLDNFDGPAVGEVAVEAQLYE
EAFAIFKKFNLNVQAVNVLLDNVRSIERAVEFAFRVEEDSVWSQVAKAQLREGLVSDAIE
SFIRADDATHFLEVIRVSEDTDVYDDLVKYLLMVRQKVKEPKVDSELIYAYAKIDRLGEI
EEFILMPNVANLQHVGDRLYDEALYEAAKIIYAFISNWGKLAVTLVKLQQFQGAVDAARK
ANSAKTWKEVCFACVDAEEFRLAQICGLNIIIQVDDLEEVSEYYQNRGCFNELISLMESG
LGLERAHMGIFTELGVLYARYRYEKLMEHIKLFSTRLNIPKLIRACDEQQHWQELTYLYI
QYDEFDNAATTVMNHSPEAWEHMQFKDIVAKVANVELYYKAVHFYLQEHPDIINDLLNVL
ALRLDHTRVVDIMRKAGHLRLIKPYMIAVQSNNVSAVNEALNEIYVEEEDYDRLRESIDL
HDSFDQIGLAQKIEKHELVEMRRVAAYIYKKAGRWKQSIALSKKDNMYKDCMETASQSGE
HELAEQLLVYFIEQGKKECFATCLFVCYDLIRPDVALELAWINNMMDFAFPYLLQFIREY
SGKVDELIKDKLEAQKEVKAKEQEEKDVISQQNMYAQMLPLALPAPPMPGMGGGGGYGPP
PQMGGMPGMPPMPPYGMPPMGGY
NT seq
5112 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgccaacgcccccatcacgatgaaggaggtcctgacgcttccgagcatcggg
atcaatcagcaattcatcacgtttacaaatgttactatggagtctgacaagtatatctgt
gtacgagagacgtcaccgcaaaacagtgttgtaattatagatatgaatatgccgatgcag
cctcttaggaggcctattactgcagactctgctcttatgaacccaaactcgaagatcctt
gccttgaaagctcaagttccaggaactactcaggatcatctacagatatttaacattgaa
gccaaagcaaagttgaaatcacatcagatgcctgagcaggttgtcttttggaagtggatt
acaccaaagatgttggggctggtcacacagaattccgtctatcattggtcaattgaaggt
gattctgagccagttaagatgtttgatagaacagccaatttggccaacaatcaaattata
aactataagtgctctcctaatgagaagtggttggttttaattggaattgctcctggctct
cctgagagacaacaattggtaaaaggaaatatgcagcttttctctgtggatcaacagcgg
agtcaggcccttgaggcacatgctgcatcgtttgcgcagtttaaggttcctgggaatgag
aatccttctattcttatatcatttgcaagcaagagctttaatgctgggcagataacatca
aagttgcatgtcattgagcttggtgcccaacctggaaaaccatcatttacaaaaaaacaa
gcagatctcttttttccccctgattttgctgatgattttcctgttgccatgcaggtctct
cacaaatttaacttgatatatgttatcaccaaacttggcctgttgtttgtgtacgatcta
gagactgcttctgctatctacagaaatcggattagtccagacccaattttcttgacttct
gaagcttcctcagttgggggtttctatgccattaataggcgaggacaagttcttttggct
acagtaaacgaggctaccattataccttttattagtggccaattgaacaatttggagctt
gctgtcaatcttgctaaaagaggaaacctcccaggtgcagaaaatctggttgtccagcgg
ttccaggagttgttcgctcaaacaaagtacaaggaggctgctgagcttgctgctgaatct
cctcaaggaattctaaggacacctgatacagtggccaaattccagagtgttcctgtacaa
gctggacaaactcctccattgttacagtattttgggactcttttgactagagggaaactc
aattcatatgagtcactggaactatctcggctggttgtgaaccaaaacaagaagaacctc
ctggaaaactggttggcagaggataaactagaatgcagtgaagaacttggagaccttgtg
aagactgtggataatgatctcgctctgaaaatatacatcaaagctcgggcgactccaaaa
gttgtagcagcttttgcagaaagaagggagtttgacaaaatactgatttactcaaagcag
gttgggtacacacctgattacctgtttcttctgcaaaccatactccgtacagatcctcag
ggagcagtaaattttgcattaatgatgtctcaaatggaaggaggttctccagttgactac
aacaccatcactgatctttttcttcagagaaatctgatccgtgaagcgacttctttcctt
ctggatgtgctaaagccaaatttacctgagcatgcttttctgcaaactaaggttctggag
ataaatttggtaacttttcctaatgtggctgatgcggtattagcaaatgggatgttcacc
cactatgaccggcctcgcattgctcaactttgtgaaaaggctggactttatatccaatcc
ttgaagcattactcagagttacctgatataaaacgtgtaattgtaaacacacatgctatc
gagccacaggctcttgttgagttttttggcactctttctagcgagtgggctatggagtgc
atgaaggatctgttgctggtcaacctgagaggcaatctgcagataattgttcaggcttgc
aaggagtactgtgagcaacttggtgttgatgcatgtattaagctctttgagcagttcaag
tcatatgaagggctatactttttcctaggttcatatttgagtatgagtgaggatcctgag
atccatttcaagtacattgaagcagctgccaagactggtcaaataaaggaggttgagcgt
gtaactagagagtctaacttctatgatgctgaaaagacgaagaactttttgatggaagct
aagctgcctgatgcacgacctttgataaatgtctgtgatcgtttcagctttgtgcctgat
cttactcattacctctacacaaacaacatgcttcgttacattgaaggctacgtgcagaag
gtgaaccctgggaatgctcccttagttgtcgggcagttgcttgatgatgaatgccctgaa
gattttataaaaggcctcattctctctgttcgttcattgcttcctgttgaaccacttgtc
gaggaatgtgagaagagaaatcgactccgtctcctcactcagttcttggagcatttagtt
agtgagggaagccaagatgtgcatgtccataatgccttgggtaaaattatcatagacagt
aacaacaaccctgagcatttcctgaccaccaacccttactacgactctaaggttgtgggt
aagtactgcgagaaacgtgatcctaccctagcagttgtggcatacagaagaggacaatgt
gacgaggaactcatcaatgtcactaacaaaaactctttgtttaagttacaagccaggtat
gtagtggagaggatggatggtgatctgtgggataaggttctcgatgaaaacaatgattat
agaagacagcttattgaccaagttgtgtctactgctttacctgaaagcaagagcccagag
caagtttctgcagctgttaaagcattcatgactgctgatttgccgcacgagcttattgag
cttcttgaaaagattgttctacaaaattctgccttcagtggaaacttcaatctgcaaaat
ctgcttatattgacagctattaaggcagatccgtctagagttatggattacatcaacagg
ctggacaactttgatggacctgcagttggagaagtcgcagttgaagcccaattatatgag
gaagcatttgctatcttcaagaagttcaacttaaatgttcaggctgtcaatgtattgctg
gataatgtcaggagcattgagcgtgcagttgagtttgcattccgggtcgaagaagattct
gtttggagccaagtcgctaaggcgcaactcagggaaggactagtcagtgatgcaattgag
tcctttatccgtgctgatgatgccactcatttcttggaggtcatacgtgtctctgaagat
actgatgtctatgatgacttggtcaaataccttctgatggttagacagaaggtgaaggaa
cccaaggttgatagtgagctcatctatgcatatgcaaagattgatcggttaggtgagatt
gaagaattcattctgatgccaaacgttgctaatctacaacatgttggtgatcgtctgtat
gacgaagctctctatgaggctgcaaaaataatctatgcgttcatatcaaactggggcaag
ttagccgtcacacttgtgaagttgcaacagttccaaggtgctgttgatgctgcaaggaaa
gcaaacagtgcaaagacatggaaggaagtctgctttgcttgcgttgatgctgaggaattc
cggttggctcaaatatgtggtcttaacattatcattcaggtggatgacctggaagaagtc
agcgagtactaccagaacagagggtgcttcaatgaattaatctcacttatggagagtgga
cttgggcttgaacgtgctcacatgggtatcttcaccgagttgggtgtactctatgctaga
tatcgttatgagaaacttatggaacacatcaagttattttcaactcgcctcaatattccc
aagcttatacgggcctgtgatgaacaacagcactggcaggaacttacctatctgtacatt
caatatgatgagtttgataatgctgcgaccaccgtcatgaaccattctcctgaagcatgg
gagcacatgcaattcaaagacattgttgccaaggtagcgaatgttgaactgtactacaag
gctgtgcacttctacttgcaagagcatccggatataatcaacgatcttctcaacgtactt
gcgttgcggttagaccatactcgtgttgttgatataatgcggaaggctggtcacttgcgt
cttatcaagccatacatgattgcagttcagagcaacaatgtctctgctgttaatgaggct
ctgaatgagatatacgtggaagaagaagactacgataggttgcgagagtctattgattta
catgacagctttgaccagattggcctcgctcagaagatcgagaaacacgaacttgttgaa
atgagacgtgtggctgcttatatctacaagaaagcgggcagatggaagcaatcaattgca
ttatcaaagaaagacaacatgtacaaggactgtatggaaacggcttcacaatcaggcgaa
catgaacttgcagaacaactactggtgtatttcattgaacagggcaaaaaggaatgcttt
gctacatgtctctttgtatgttatgacttaatccgaccagacgtggctctagaacttgcc
tggatcaacaatatgatggactttgccttcccgtatctcctccagtttatccgagagtac
tctggcaaagtggatgagctaataaaggacaagcttgaggcacaaaaagaggtgaaggcc
aaagagcaggaagagaaggatgtcatatcccaacagaacatgtatgcccaaatgttgcca
cttgctttacctgcaccaccgatgccaggaatgggaggtggtggtgggtatggtcctcca
ccacaaatgggcggtatgccaggaatgcctcccatgccaccatatggaatgccaccgatg
ggcggctactaa
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integrated database retrieval system
