Arabidopsis thaliana (thale cress): AT3G09620
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Entry
AT3G09620 CDS
T00041
Name
(RefSeq) P-loop containing nucleoside triphosphate hydrolases superfamily protein
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
AT3G09620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ath03041
]
AT3G09620
Enzymes [BR:
ath01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AT3G09620
Spliceosome [BR:
ath03041
]
Complex A
U2 snRNP components
U2 related factors
AT3G09620
Complex B
AT3G09620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_12
ResIII
Motif
Other DBs
NCBI-GeneID:
820119
NCBI-ProteinID:
NP_187573
TAIR:
AT3G09620
UniProt:
Q9SF41
LinkDB
All DBs
Position
3:complement(2949152..2952220)
Genome browser
AA seq
989 aa
AA seq
DB search
MLEKSKSRKENDRKDRDRSKKENGRRDTTEMRSRVKRCDSEEEERIRIRRDRKSSDFEEE
EYERDSKRRGEDKGRGRRERDRDRGKYLKRDRERREREKEKGRKKQKKERSREDCNEESD
DVKCGLKRKRTERSRHGDDDVEKKTRDEQVEDEQKQLAEEVEKRRRRVQEWQELKRQNEE
AQIESKGPETGKAWTLDGESDDEVKSDSEMDVDRDTKLENGGDAKMVASENETAVTVSEN
GGDRAADEDEIDPLDAFMNTMVLPEVEKLSNIVIDGILDFKMNGKETGDQAKKGFNKAAL
GRIIQGEDSDSDYSEPKSDDDPSLDEDDEEFMKRVKKTKAEKLSLVDHSKIEYEPFRKNF
YIEVKDISRMTQDAVNAYRKELELKVHGKDVPRPIQFWHQTGLTSKILDTLKKLNYEKPM
PIQAQALPIIMSGRDCIGVAKTGSGKTLGFVLPMLRHIKDQPPVEAGDGPIGLVMAPTRE
LVQQIYSDIRKFSKALGIICVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDILCTSSGK
ITNLRRVTYLVMDEADRMFDMGFEPQITRIVQNIRPDRQTVLFSATFPRQVETLARKVLN
KPVEIQVGGRSVVNKDITQLVEIRPESERFSRLLELLGEWYEKGKVLVFVRSQEKSISDF
KSDVCNLLIATSVAARGLDVKELELVVNFDAPNHYEDYVHRVGRTGRAGRKGCAVTFISE
DDAKYAPDLVKALELSEQPVPDDVKAVAEGFMAKVKQGIEQAHGTGYGGSGFKFNEEEDE
VRKAAKKAQAKEYGFEEEKSDSEDENDVVRKAGGDISQQQITLAQIAAIASAASKAPVTA
NQLLPNGGGLATEPGIPPTDGAGRVAAMIAAANVQQYLAKIQADAIPEHYEAELEINDFP
QNARWKVTHKETLGPISEWSGASITTRGKFYEAGRIPGPEERKLYLFVEGPTEISVKTAK
AELKRVLEDITNQTFSLPGGAQSGRYSVL
NT seq
2970 nt
NT seq
+upstream
nt +downstream
nt
atgttagagaaatctaagtccaggaaggaaaatgatcgcaaagatcgtgatcgcagtaag
aaagagaatggtcggcgagatacgacggagatgcgctcgagagttaagagatgcgattct
gaggaagaggagaggatacggatacggagggatagaaaaagtagcgattttgaagaagaa
gaatacgagagggatagtaaacgcagaggggaggacaagggaagaggacgccgagaacgt
gacagagatagaggaaaatatctgaaaagggacagagagaggagagaacgtgagaaagaa
aagggtaggaagaaacagaaaaaggagaggtcacgtgaggattgtaatgaagagagtgat
gatgtcaagtgtggcttgaaacgcaaaagaacggagcgtagcaggcatggagatgacgat
gttgagaagaaaactcgggatgaacaagtagaggatgagcagaagcagttggctgaggaa
gtagaaaaacggaggagaagagtccaggagtggcaagagttgaagaggcaaaacgaggaa
gctcaaattgaaagtaagggtcctgagaccggtaaggcttggactcttgatggtgaatct
gatgatgaagttaaatcagactcagagatggatgttgatcgtgatactaaactcgaaaat
ggtggagatgccaagatggtcgcctcggagaatgagacagctgttactgtctctgagaat
ggaggtgacagagctgcagatgaagacgaaattgatcccttagatgcttttatgaatact
atggtattacctgaggttgaaaagcttagcaatattgtgatcgatggtattttggatttt
aaaatgaatgggaaggaaactggtgaccaagccaaaaaaggttttaataaggccgccctt
ggtaggataattcaaggtgaagattctgattcagattactcagaaccaaagagtgatgat
gatccaagtttagacgaagacgacgaggagtttatgaagagagttaagaagacaaaagca
gagaaattgtctcttgttgaccactccaaaatagagtatgaacctttccggaagaatttt
tatatcgaagtcaaggatatctcaaggatgacacaggatgcagtgaacgcttatagaaag
gaattggagctgaaagttcatgggaaagatgttccaagacccattcaattttggcaccag
actggattaactagcaaaattttggatactctgaagaagcttaactatgaaaagccaatg
cctatccaagcacaagcacttccaatcatcatgagcggtagagactgcattggggttgcc
aaaaccgggtcaggtaaaacccttggctttgttttgcctatgttgaggcatatcaaagat
cagcctcccgttgaagctggtgatgggccgattgggcttgtaatggcacctactagagaa
cttgttcagcagatttacagcgatatcagaaagttttctaaggcattgggtataatatgt
gtgcctgtgtatggaggatctggagttgcccagcaaatcagtgagcttaagcgaggtacc
gagattgttgtttgtactcctggaagaatgatcgatattctttgcacaagcagtggaaaa
attaccaatctacgaagggtcacatatttggtaatggatgaagctgatcgtatgtttgat
atgggttttgagcctcaaataactcgcattgttcaaaatattcgacctgatcgtcaaact
gtgctcttttctgccacttttccacgccaagttgaaactttggcacgtaaagtcttgaac
aagcctgtggagatacaggtcggtgggaggagtgttgtgaataaagatataactcagtta
gttgaaatcagacccgagagtgagaggttctcaagacttctggaacttcttggggaatgg
tatgagaaaggaaaagttttggtctttgttcgttcgcaggaaaaatctatatctgatttt
aagagcgatgtctgcaatttgttgatcgccacaagtgttgcagccaggggtctagatgtg
aaagagctcgagttggttgtaaacttcgatgcaccaaaccactatgaagactatgtgcat
cgtgttggtaggacaggtagggcagggcggaaaggctgtgctgtaacatttatctctgag
gatgatgcaaaatatgcaccagatttagtcaaggccctggaactatctgagcagccagtt
cctgatgatgttaaagcagtagccgaagggttcatggcgaaagtaaaacagggtattgag
caagctcatggaactggctatggtggaagtggctttaaattcaacgaagaggaggatgaa
gttaggaaagcagcaaagaaagcacaagcgaaggagtatggctttgaagaagagaagtct
gactcagaagatgagaatgatgtagtaagaaaggctggtggtgatatctcacagcagcag
attactcttgctcagatagccgccattgcttctgctgcttctaaggctcctgtgactgct
aaccaattgcttccaaatggtggtgggctagccactgagccaggtatccctcctactgat
ggagcaggccgcgttgcagccatgattgctgctgctaacgtgcaacagtaccttgcaaag
attcaagctgatgcgatacctgaacactatgaagcagaattggaaatcaatgatttccca
cagaatgctcggtggaaagttacccacaaagaaacgctgggaccaatatcagagtggagt
ggagcttccattaccactagaggtaagttttatgaggcaggacgtatcccgggacctgag
gaacgcaagctctatttgttcgtcgaagggcctaccgaaatatctgttaagacagcgaaa
gctgaactcaagcgtgttcttgaagacataactaaccaaaccttctcccttcctggagga
gcacaatcaggcagatactctgttttataa
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integrated database retrieval system
