Arabidopsis thaliana (thale cress): AT3G09720
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Entry
AT3G09720 CDS
T00041
Name
(RefSeq) P-loop containing nucleoside triphosphate hydrolases superfamily protein
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
ath
Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ath03009
]
AT3G09720
Enzymes [BR:
ath01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AT3G09720
Ribosome biogenesis [BR:
ath03009
]
Eukaryotic type
90S particles
Helicases
AT3G09720
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
P-loop_SecA
UTP25_NTPase-like
Calpain_III
Motif
Other DBs
NCBI-GeneID:
820129
NCBI-ProteinID:
NP_001326599
TAIR:
AT3G09720
UniProt:
Q84TG1
A0A654F5M8
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All DBs
Position
3:complement(2979772..2983618)
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AA seq
541 aa
AA seq
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MEKSSYFLFGGTNFNKKKFAPDFAKFKNSTEDDDSNKKVNFFVEEEEDTEQPEAEKVIVS
SKKRKRRSSNSVPVEGFDVFKSSKKARAKGKAEEQITKNEIVENPKKELNRQMERDALSR
KQYSIHVSGNNIPPPLKSFAELSSRYGCEGYILRNLAELGFKEPTPIQRQAIPILLSGRE
CFACAPTGSGKTFAFICPMLIKLKRPSTDGIRAVILSPARELAAQTAREGKKLIKGSNFH
IRLMTKPLVKTADFSKLWCDVLISTPMRLKRAIKAKKIDLSKVEYLVLDESDKLFEQSLL
KQIDCVVKACSNPSIIRSLFSATLPDSVEELARSIMHDAVRVIIGRKNTASETVKQKLVF
AGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYDELKCENIRAGVIHSDLPPGERE
NAVDQFRAGEKWVLIATDVIARGMDFKGINCVINYDFPDSASAYIHRIGRSGRAGRSGEA
ITFYTEQDVPFLRNIANTMMSSGCEVPSWIMSLKKKKWRKHRPRRDSISTKPKADKNDTD
E
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggagaaaagctcatattttctgtttggtggaacaaacttcaataagaagaagtttgct
cctgattttgctaaattcaagaattctacggaggatgatgattccaataagaaagtgaac
ttctttgtggaagaagaagaggacactgaacagccggaggcggagaaagttattgtgtcc
tctaagaagaggaaacgaagatcttctaattctgtgccagttgaaggattcgatgtgttc
aagagctcaaagaaggcacgtgctaaaggtaaagcagaagaacaaatcacaaagaatgag
attgtagagaatcccaagaaggaacttaatcgtcaaatggagcgagatgctttgtcgagg
aaacagtacagcattcatgtttccggtaacaatattccaccgccgcttaaaagtttcgca
gagttgtcatccaggtatggctgtgaaggatacatattacgcaatttggctgaactagga
tttaaagagcctaccccaatccaaagacaggctattccaattctcctatcgggtcgtgaa
tgctttgcctgtgctccgactgggtcaggaaaaacctttgcttttatttgtcccatgctt
ataaaactcaagcgcccttcaactgatggaataagagctgttatcctttctcctgctcgg
gaactggctgcccaaacagctagagaaggaaagaaacttattaaaggaagcaatttccac
attagattgatgactaaaccccttgtcaaaacagctgacttctcaaagctgtggtgtgat
gttctcatatcaacgccgatgcggttgaaaagagcaatcaaggctaaaaagattgactta
agcaaggtcgagtaccttgtccttgatgaatctgacaagctgtttgagcagagcttgtta
aagcagatagattgtgtggttaaggcttgttcaaatccttcgatcatacgttcattgttc
agtgctactttgcccgattctgttgaagaacttgcacgttccataatgcatgatgctgtt
cgtgttatcattggccgaaaaaacacagcatctgaaaccgtcaagcaaaagctggttttt
gctggaagtgaagaagggaaacttcttgctcttcgccaaagctttgcagagagtctgaat
ccaccggtactgatctttgtacaaagcaaagaacgagcaaaagaactctatgatgaactg
aaatgtgaaaacatcagagccggagtcatccattccgatctccctccgggagagcgggaa
aatgcagttgatcaattcagagcgggagaaaaatgggttttgatagccactgatgtgatt
gccagaggtatggatttcaaaggcatcaactgcgtgataaactatgatttcccggattca
gcttctgcatacatccacaggattggacggtctgggagagcgggaaggagcggagaagcg
ataactttctacacggaacaagatgtgcctttcctaaggaacatagccaacacaatgatg
tcatcaggctgtgaggttccatcgtggatcatgtctttgaagaagaagaaatggaggaag
cataggccgagacgtgattctatatctactaaaccaaaagccgataaaaacgatacagat
gagtaa
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