Arabidopsis thaliana (thale cress): AT3G10230
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Entry
AT3G10230 CDS
T00041
Symbol
LYC
Name
(RefSeq) lycopene cyclase
KO
K06443
lycopene beta-cyclase [EC:
5.5.1.19
]
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath00906
Carotenoid biosynthesis
ath01100
Metabolic pathways
ath01110
Biosynthesis of secondary metabolites
Module
ath_M00097
beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
AT3G10230 (LYC)
Enzymes [BR:
ath01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.19 lycopene beta-cyclase
AT3G10230 (LYC)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Lycopene_cycl
DAO
Pyr_redox_2
Thi4
FAD_oxidored
Pyr_redox_3
HI0933_like
Pyr_redox
NAD_binding_8
Trp_halogenase
GIDA
FAD_binding_3
FAD_binding_2
XdhC_C
Motif
Other DBs
NCBI-GeneID:
820185
NCBI-ProteinID:
NP_187634
TAIR:
AT3G10230
UniProt:
Q38933
A0A178VBX7
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Position
3:complement(3164075..3166038)
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AA seq
501 aa
AA seq
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MDTLLKTPNKLDFFIPQFHGFERLCSNNPYHSRVRLGVKKRAIKIVSSVVSGSAALLDLV
PETKKENLDFELPLYDTSKSQVVDLAIVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIWP
NNYGVWVDEFEAMDLLDCLDTTWSGAVVYVDEGVKKDLSRPYGRVNRKQLKSKMLQKCIT
NGVKFHQSKVTNVVHEEANSTVVCSDGVKIQASVVLDATGFSRCLVQYDKPYNPGYQVAY
GIVAEVDGHPFDVDKMVFMDWRDKHLDSYPELKERNSKIPTFLYAMPFSSNRIFLEETSL
VARPGLRMEDIQERMAARLKHLGINVKRIEEDERCVIPMGGPLPVLPQRVVGIGGTAGMV
HPSTGYMVARTLAAAPIVANAIVRYLGSPSSNSLRGDQLSAEVWRDLWPIERRRQREFFC
FGMDILLKLDLDATRRFFDAFFDLQPHYWHGFLSSRLFLPELLVFGLSLFSHASNTSRLE
IMTKGTVPLAKMINNLVQDRD
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atggatactctgttgaaaacacccaacaagctcgattttttcatccctcagtttcatggg
tttgagagattatgcagtaacaatccataccattcaagggttaggcttggtgtgaagaaa
agggctatcaaaattgtctctagtgtagtgagtggtagcgctgctcttttggatcttgtt
cctgaaactaagaaggagaatcttgactttgagcttcctttgtacgacacttccaagagt
caagttgttgatttggctattgttggtggtggtcctgctggtttagccgtggctcagcag
gtttctgaagctggactctctgtttgttccattgatccttctcctaagctcatatggcct
aacaattatggagtttgggttgatgagtttgaggctatggatttactagactgcctggat
accacatggtctggtgctgttgtctatgtcgatgaaggtgtcaagaaggatttgagccgg
ccttatgggagagttaaccggaaacagctcaaatccaaaatgcttcagaaatgtattacc
aacggtgttaaatttcatcagtctaaggtcactaatgtggttcacgaggaggcaaactcc
actgtggtctgcagtgacggtgtaaagattcaggcttccgtggttcttgatgccactggg
ttttcccgatgcttggttcagtatgacaaaccttacaaccctgggtaccaagtagcttac
gggattgtagctgaagttgatggtcacccattcgatgtagacaaaatggtgttcatggat
tggagagacaaacatctggactcatatcctgagctgaaagaacggaacagcaagatccca
acgttcttgtacgctatgccattttcttccaaccgaatatttcttgaagaaacttcttta
gttgctagacctggtctgagaatggaagatatccaagaaagaatggctgctagactgaaa
catctggggatcaatgtgaagaggattgaggaagacgagcgttgtgtgatcccgatgggc
ggtcctttaccagtcttacctcaacgggttgtggggattggtgggacagcaggaatggtt
catccttcaactggttacatggttgctaggactcttgcagctgcaccaatagttgcaaat
gccattgtgagatacctcggttcaccaagtagtaatagcctgagaggagatcaactctct
gctgaggtttggagagacttgtggcctatcgaacggcgtagacagagggagttcttctgt
tttggaatggatattctgctgaaactcgatttagacgctactagaaggttctttgatgca
ttctttgatctgcaacctcattactggcacggattcttgtcttccaggctgtttctcccg
gaactgttggtcttcgggttgtcgctcttctcacacgcttccaatacctcaagattggag
atcatgacaaaggggactgttcctcttgctaagatgatcaacaatttggtacaagataga
gactaa
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