Arabidopsis thaliana (thale cress): AT3G10650
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Entry
AT3G10650 CDS
T00041
Symbol
NUP1
Name
(RefSeq) nuclear pore complex protein
Organism
ath
Arabidopsis thaliana (thale cress)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
820234
NCBI-ProteinID:
NP_001327263
TAIR:
AT3G10650
UniProt:
Q9CAF4
A0A178V9H6
LinkDB
All DBs
Position
3:complement(3325074..3331282)
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AA seq
1309 aa
AA seq
DB search
MASAARGESSNPYGGGLGTGGKFRKPTARRSQKTPYDRPTTSVRNAGLGGGDVRGGGWLS
KLVDPAQRLITYSAQRLFGSLSRKRLGSGETPLQSPEQQKQLPERGVNQETKVGHKEDVS
NLSMKNGLIRMEDTNASVDPPKDGFTDLEKILQGKTFTRSEVDRLTTLLRSKAADSSTMN
EEQRNEVGMVVRHPPSHERDRTHPDNGSMNTLVSTPPGSLRTLDECIASPAQLAKAYMGS
RPSEVTPSMLGLRGQAGREDSVFLNRTPFPQKSPTMSLVTKPSGQRPLENGFVTPRSRGR
SAVYSMARTPYSRPQSSVKIGSLFQASPSKWEESLPSGSRQGFQSGLKRRSSVLDNDIGS
VGPVRRIRQKSNLSSRSLALPVSESPLSVRANGGEKTTHTSKDSAEDIPGSSFNLVPTKS
SEMASKILQQLDKLVSTREKSPSKLSPSMLRGPALKSLQNVEAPKFLGNLPEKKANSPDS
SYQKQEISRESVSREVLAQSEKTGDAVDGTSKTGSSKDQDMRGKGVYMPLTNSLEEHPPK
KRSFRMSAHEDFLELDDDLGAASTPCEVAEKQNAFEVEKSHISMPIGEKPLTPSEAMPST
SYISNGDASQGTSNGSLETERNKFVAFPIEAVQQSNMASEPTSKFIQGTEKSSISSGKPT
SEEKRIPLEEPKKPAAVFPNISFSPPATGLLNQNSGASADIKLEKTSSTAFGVSEAWAKP
TESKKTFSNSASGAESSTSAAPTLNGSIFSAGANAVTPPPSNGSLTSSPSFPPSISNIPS
DNSVGDMPSTVQSFAATHNSSSIFGKLPTSNDSNSQSTSASPLSSTSPFKFGQPAAPFSA
PAVSESSGQISKETEVKNATFGNTSTFKFGGMASADQSTGIVFGAKSAENKSRPGFVFGS
SSVVGGSTLNPSTAAASAPESSGSLIFGVTSSSTPGTETSKISASSAATNTGNSVFGTSS
FAFTSSGSSMVGGVSASTGSSVFGFNAVSSASATSSQSQASNLFGAGNAQTGNTGSGTTT
STQSIPFQFGSSPSAPSFGLSGNSSLASNSSPFGFSKSEPAVFTSVSTPQLSSTNSSASS
SSTMSSPLFGTSWQAPNSSPNSGPVFSSSFTTSSTPTTFSFGGSSAATVSSTTTPIFGAS
TNNTPSPSPIFGFGSTPPTTPQQPVFGNSGTPSQSLFGNSTPGFAFGAPNNGNGINNNQQ
VSMEDSMAEDTDQANRASMVAPMFGQAAVSMPQPNFAFGGGAATQPPSMANPFQFGGQPM
ASTLQNASPFQASQSLEFQGGGSFSLGSTGGGDKSGRRIFKAKKSTRKK
NT seq
3930 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcgcggcacggggagagagcagcaatccatacggcggcggattgggaaccgga
ggaaagttccggaagccgacggctcgtaggtctcagaaaactccttatgatcgaccaacg
acttctgtgaggaacgctggacttggtggcggagatgtcagaggcggcggctggttgtca
aaattggtggatccggcgcagagacttattacttatagtgctcagaggctcttcgggtcc
ttatcccggaaacgcctcggctctggtgagacgcctttacaatcgccggaacagcagaag
cagcttccagaaagaggtgtgaatcaggagacgaaggttggacacaaggaggacgtctct
aatttgtccatgaagaatggtttgattcggatggaagataccaatgcctctgtcgatcca
cctaaggatggatttacagatcttgagaaaatcttacagggaaaaacttttacaaggtct
gaagttgatcgattaactaccttgttgcgttcaaaagctgctgattcatccactatgaat
gaggagcagagaaatgaagtgggtatggttgtgagacatccaccatcacatgagagggat
aggacgcatccagataatggaagtatgaacacccttgtttcaacacctcctggaagtttg
agaactctcgatgagtgcattgcgtcgccagcacagcttgcaaaagcctacatgggtagc
agaccttcagaagttactccttctatgttagggttacgtggtcaagcgggtagggaagat
tctgttttcctgaacagaaccccttttccgcaaaagtcacctacaatgtcgctggtaaca
aagccttctggacaaagacctttggaaaatggttttgttacccctagatctcggggaaga
tctgctgtttatagcatggccagaacaccatactctaggcctcagtccagtgtgaagatt
gggtctctttttcaagcatctccaagcaaatgggaagaaagcttaccttctggttctaga
caagggtttcaatcgggtcttaaacgcaggagctcagtcttagataatgatataggatct
gtgggccctgtaaggaggatccggcaaaaatctaacctttcatctcgaagcttggctctg
cctgtttctgagagcccactttctgtccgtgccaatggtggagaaaaaactacgcataca
tctaaagatagtgcagaggatattcctggttcaagttttaaccttgttcctaccaagtcc
agtgagatggcgtcaaaaatattgcagcaacttgataaactggtttcaacaagggagaaa
tcaccaagtaagttatcaccatccatgctacggggtcccgctctcaaaagcctccagaat
gtagaggcgccaaagtttttgggtaatcttcccgagaagaaggcaaattcgccagattct
agttatcaaaagcaggaaatatctagagaaagtgtctccagagaggttttagctcagagt
gagaagactggtgatgctgttgatggaacaagcaaaacaggttccagtaaagatcaggat
atgcgtggtaaaggtgtttatatgcctctcacgaattctttggaagagcatcctccaaag
aagagatcatttcgaatgagtgcgcatgaggatttcttggagttggatgatgatcttggt
gcagcatctactccatgtgaagtagcagaaaaacagaatgccttcgaagtagagaaaagt
catatcagcatgcctataggggagaaaccacttactccatctgaagccatgccatctaca
tcatatatttctaatggtgacgcctctcagggtacttctaatgggtctctggaaactgaa
agaaacaagtttgttgctttccccattgaagctgttcagcaaagtaatatggcctctgag
ccaacttcaaagttcatccaagggactgagaaatcgagtatttcttctggcaagccaacc
tcagaagagaaacgtatccctctggaagagcctaaaaaacctgctgctgtatttcccaat
atctccttttcaccgcctgccacgggcttattaaatcaaaacagtggtgcatctgcagac
atcaagttagaaaagactagcagcactgcgtttggagtatcagaggcttgggcaaagcca
actgaatcaaagaaaacgttcagcaacagtgcttctggagctgagtcatctacctcagct
gcaccaaccctcaatggtagtatattctcagctggagcaaacgctgtcactccacctccg
agtaatggctctcttacttcaagcccttccttcccaccttctatttcaaatataccttct
gataattctgtgggtgatatgccgtccactgttcaatcttttgctgctactcacaattcc
tctagtatatttggaaagttgcctaccagtaacgacagcaactcacaatcaacttcagca
tctcccctctcttccacatcacctttcaagtttgggcaacctgcagctccgttttctgcg
ccagcagtgtctgaatctagcggtcagatctcaaaggagactgaagtaaaaaacgccaca
tttggaaatacaagcactttcaagtttggaggtatggcttcagcagaccagagcactggc
atcgtttttggtgctaaatctgcggaaaataaaagcagacctggttttgtgtttgggagc
tcctccgttgttggtggcagcacattaaacccttctactgctgcagcttcagcacctgag
agctctggaagtttaatatttggtgtgacatcgtcctcaacccctgggacagagaccagc
aaaatttctgcgagttctgcagctactaatactggaaatagtgtatttggcacttcctct
tttgcatttacaagctctggtagtagcatggttggtggtgtatctgcaagtactggaagc
agtgtttttggattcaatgctgtttcatcagcttctgctactagctctcaatctcaggcc
tcaaatctttttggtgctggaaatgctcagacgggtaatactgggagcggaaccacaaca
tcaactcaaagcatcccctttcagtttggttcatctccatcagctccttcatttggtttg
tctgggaactcttctcttgcatcaaacagttctccatttggattttctaagtcggaacct
gctgtatttacttctgtgtcaactcctcaattgagttcgacaaactcctctgcaagctct
agtagtacaatgagctctcccctatttgggacaagctggcaagctcccaactcttctcca
aactctggtccagtcttcagttcctcgttcaccacatcttcaactcctaccaccttttcc
tttggaggatcttctgctgctactgtttcgagcactactactcccatttttggtgcatct
accaacaacaccccgtcaccttcacctatctttggtttcgggtcaacccctcctaccact
ccccagcagccggtatttggtaactcagggactccatcacagtctctgtttggtaactca
actcctgggtttgcatttggtgcacctaataatggaaatggtatcaacaataaccaacaa
gtgagcatggaagacagtatggcagaagacacagaccaagctaatagagcatctatggta
gccccaatgtttggacaagcagcagtctcgatgcctcaaccaaactttgccttcggtgga
ggagcagcaacgcagcctccatcaatggcaaaccccttccagtttggaggccaaccaatg
gcaagcacgttacagaacgcatcacctttccaggcatcacagagtctagagttccaagga
ggtgggagcttttcactaggcagcactggaggtggcgataagtcaggccgcagaatcttc
aaagcaaagaaatccaccaggaagaaataa
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