Arabidopsis thaliana (thale cress): AT3G12400
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Entry
AT3G12400 CDS
T00041
Symbol
ELC
Name
(RefSeq) Ubiquitin-conjugating enzyme/RWD-like protein
KO
K12183
ESCRT-I complex subunit TSG101
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath03250
Viral life cycle - HIV-1
ath03272
Virion - Hepatitis viruses
ath04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
AT3G12400 (ELC)
03272 Virion - Hepatitis viruses
AT3G12400 (ELC)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
AT3G12400 (ELC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ath04131
]
AT3G12400 (ELC)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ath04147
]
AT3G12400 (ELC)
Membrane trafficking [BR:
ath04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-I complex
AT3G12400 (ELC)
Exosome [BR:
ath04147
]
Exosomal proteins
Proteins found in most exosomes
AT3G12400 (ELC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UEV
Vps23_core
UQ_con
NDC80_loop
Motif
Other DBs
NCBI-GeneID:
820419
NCBI-ProteinID:
NP_566423
TAIR:
AT3G12400
UniProt:
Q9LHG8
A0A178VBS4
LinkDB
All DBs
Position
3:complement(3943760..3945863)
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AA seq
398 aa
AA seq
DB search
MVPPPSNPQQVQQFLSSALSQRGPSSVPYEESNKWLIRQHLLNLISSYPSLEPKTASFMH
NDGRSVNLLQADGTIPMPFHGVTYNIPVIIWLLESYPRHPPCVYVNPTADMIIKRPHAHV
TPSGLVSLPYLQNWVYPSSNLVDLVSDLSAAFARDPPLYSRRRPQPPPPSPPTVYDSSLS
RPPSADQSLPRPFPPSPYGGGVSRVQVQHVHHQQQSDDAAEVFKRNAINKMVEMVHSDLV
SMRRAREAEAEELLSLQAGLKRREDELNIGLKEMVEEKETLEQQLQIISMNTDILDSWVR
ENQGKTKNLVDLDVDNAFECGDTLSKQMLECTALDLAIEDAIYSLDKSFQDGVVPFDQYL
RNVRLLSREQFFHRATGSKVRAAQMEVQVAAIAGRLHS
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atggttcccccgccgtctaatccgcagcaggttcagcagttcctctcctctgccctctcc
cagcgcggcccatcttcagtcccctacgaagagtccaacaagtggttgatccggcaacat
ctacttaacctaatctcttcttacccttccttagagcccaaaacggcatcgtttatgcac
aacgatggtcgctccgtcaacctccttcaagcagatggtacgattccgatgccttttcat
ggagtcacctataacatacctgtgattatctggctcctcgagtcatatcctcgtcatcct
ccttgcgtctatgtgaatcccaccgctgatatgatcatcaagcgacctcacgcacatgtc
actccttctggtctcgtttctcttccgtaccttcagaattgggtctaccctagctccaat
ctcgtagatctcgtctccgatctcagcgctgcttttgctcgtgatccgcctctttattct
cgacgccgtcctcagccaccgccaccgtctcctcctacggtatacgattcgtctctgtca
cgacctccttcggctgatcagtcattgcctagaccgttcccgccatcaccttacggcgga
ggagtaagtagggtgcaagtgcagcatgttcaccaccagcagcaatctgatgatgcggcg
gaggttttcaagagaaatgcgattaataagatggtggagatggttcatagcgatttggtt
tcgatgaggagagccagagaagctgaagcagaggagctgctgagcttgcaagctgggctg
aagagaagagaggatgagcttaatatagggttgaaagagatggttgaggagaaagaaaca
cttgaacaacaattacagattatctccatgaacactgatattctagactcgtgggttaga
gagaaccaaggcaaaaccaagaatttagttgatttggatgtggataatgcttttgaatgt
ggtgacacactctctaagcagatgttagagtgtactgctttggatttagccattgaagat
gctatttattccttggataagtcgtttcaagatggtgttgttccctttgatcagtatttg
aggaatgtgaggttgttgtcgagagaacagttcttccaccgagccacgggttctaaagtc
agggcggcacaaatggaggttcaggttgcagccatcgcaggtaggttacattcatga
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