Arabidopsis thaliana (thale cress): AT3G12860
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Entry
AT3G12860 CDS
T00041
Name
(RefSeq) NOP56-like pre RNA processing ribonucleoprotein
KO
K14564
nucleolar protein 56
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
AT3G12860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ath03009
]
AT3G12860
Ribosome biogenesis [BR:
ath03009
]
Eukaryotic type
Sno RNPs
Box C/D snoRNPs
AT3G12860
Prokaryotic type
AT3G12860
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nop
NOP5NT
6PGD_like
Motif
Other DBs
NCBI-GeneID:
820468
NCBI-ProteinID:
NP_187892
TAIR:
AT3G12860
UniProt:
Q9LTV0
A0A384L547
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Position
3:4091567..4094195
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AA seq
499 aa
AA seq
DB search
MKIYLLSESPSGYGLFEGHGSDEIGQNTEAVRSSVSDLSRFGRVVQLTAFHPFQSALDAL
NQINAVSEGYMSDELRSFLELNLPKVKEGKKPKFSLGVSEPKIGSCIFEATKIPCQSNEF
VHELLRGVRQHFDRFIKDLKPGDLEKAQLGLAHSYSRAKVKFNVNRVDNMVIQAIFMLDT
LDKDINSFAMRVREWYSWHFPELVKIVNDNYLYAKVSKIIVDKSKLSEEHIPMLTEALGD
EDKAREVIEAGKASMGQDLSPVDLINVQTFAQRVMDLADYRKKLYDYLVTKMSDIAPNLA
ALIGEMVGARLISHAGSLTNLAKCPSSTLQILGAEKALFRALKTRGNTPKYGLIFHSSFI
GRASAKNKGRIARFLANKCSIASRIDCFSDNSTTAFGEKLREQVEERLDFYDKGVAPRKN
VDVMKEVLENLEKKDEGEKTVDASEKKKKRKTEEKEEEKEEEKSKKKKKKSKAVEGEELT
ATDNGHSKKKKKTKSQDDE
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgaagatttatcttctttccgaatcaccctccggctacggattgttcgagggacacggt
tccgatgagattggacagaacacggaggcggttcggagctccgtctcggaccttagtcgg
ttcgggcgggtcgtccagctcactgcttttcacccgttccagtctgcactcgatgctctt
aaccaaatcaacgccgtctctgaaggatacatgagcgatgagctgagaagttttctggag
ctgaatctcccgaaagtgaaggaaggcaagaagcccaagtttagtttgggagtgtctgag
cctaaaatcggttcttgcatttttgaagctaccaaaattccttgccagagcaatgagttt
gtccatgagctccttagaggtgtgcgtcagcatttcgataggttcatcaaagacttgaag
cctggtgatttggaaaaagctcaacttggactagctcatagctacagcagagcaaaggtg
aagttcaatgttaaccgggtggataacatggttattcaagctattttcatgcttgacaca
cttgataaggatatcaattcctttgctatgagagtcagagaatggtactcatggcacttc
cctgagcttgtcaagatagttaatgacaactacctctacgccaaagtttcaaagattatc
gtcgacaagtcaaagttgtctgaagagcacatccctatgcttactgaagccctgggtgat
gaagataaggcaagagaggttattgaagctggaaaagcatctatgggccaggatttatca
ccggttgatctgatcaatgtccagacctttgctcagagagttatggaccttgcagattac
aggaagaagctctatgattatcttgttactaaaatgagtgacattgctccaaatttggcg
gccttgatcggagagatggttggggctaggttgatttcacatgcaggaagtctgacaaat
cttgccaagtgcccatcttcaaccctccagattctcggtgctgagaaggcacttttcagg
gcactgaaaacacgtggaaacacacccaaatatggtctaatattccattcatcattcatc
gggcgtgcatctgctaaaaacaagggccgtattgctcgtttccttgcaaacaagtgttcc
attgcttcccggattgattgtttctcagataacagcactacagctttcggtgagaaacta
agggaacaagtagaggaaagacttgacttttatgacaaaggtgttgccccacgtaagaat
gttgatgtaatgaaagaagtgttggaaaatcttgagaagaaagacgagggagaaaaaaca
gtggatgcttcggagaagaaaaagaagagaaagacagaggagaaggaggaggagaaggaa
gaggagaaatcaaagaaaaagaaaaagaaaagcaaagcagtagaaggagaggaattgaca
gcaacagataatggccatagcaagaagaagaagaaaactaagtcacaagatgatgaataa
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