Arabidopsis thaliana (thale cress): AT3G13060
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Entry
AT3G13060 CDS
T00041
Symbol
ECT5
Name
(RefSeq) evolutionarily conserved C-terminal region 5
KO
K20102
YTH domain-containing family protein
Organism
ath
Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ath03019
]
AT3G13060 (ECT5)
Messenger RNA biogenesis [BR:
ath03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
AT3G13060 (ECT5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YTH
DUF3942
Motif
Other DBs
NCBI-GeneID:
820492
NCBI-ProteinID:
NP_001327857
TAIR:
AT3G13060
UniProt:
A0A1I9LTL9
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Position
3:4180154..4183975
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AA seq
612 aa
AA seq
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MKEQTVPANNETSASFKSSQEAPVVVHPAKVAPLTGPYGLAGDFAGHLPSSILSPQAQGF
YYRGYENPTGEWDEYSSYVNVEGLDITSPVGFNENASLVYQTGYGYNPQMPYGPYSPAAS
PLPSEGQLYSPQQFPFSGASPYYQQVVPPSMQYITSPTQPELTSLVGVDQQGDNIGPRQS
YHPHPIGPFNGNQPNLGFPEWQQGFDGGIWSDWSKPSDMHRHSSSISPALSPQPLGSYGS
YGQNIPMGSQRQRSFYGFGSGSNSYNRGYMHSGGRGQGSNYGSRLISNVGMGNQGWIGVD
NSRGRGRVSDPSLGGAYNGTFDILNEQNRGPRASKPKTQVLEELDSAADSKKNNKGSAKE
HEESNNADFVTDYTNAKLFIIKSYSEDNVHKSIKYNVWASTPNGNKKLDAAYREAKDEKE
PCPLFLLFSVNASSQFCGVAEMVGPVDFEKSVDYWQQDKWSGQFPVKWHIIKDVPNSQFR
HIILENNDNKPVTNSRDTQEVKLEQGIEMLKIFKNYDADTSILDDFGFYEEREKIIQDRK
ARRQPSLPSAGVVAGENEHKPASAALPTDFMKNMSKSFAQVVRLDEGSKEAVKASSSPDA
ITTAAVSSGQSN
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgaaggagcagactgtcccggcaaacaacgagacatcagcctcttttaagtcctcccag
gaagctccagttgtagttcatccagcaaaagttgctccacttactggaccttatggttta
gccggtgattttgccggacacttacctagcagcatcctctctcctcaagcacaaggcttt
tactatagaggttatgaaaaccccacaggcgaatgggacgagtattcctcgtatgtcaat
gttgaaggattggacatcacatctcctgttggcttcaatgagaatgcttctctggtctac
caaacgggatatggatacaaccctcaaatgccatatgggccatattcccctgcagcaagt
cccttgccttctgagggacagttgtattctccacaacagtttccgttttcaggggcatca
ccgtattaccagcaggtagttcctcctagcatgcaatatattacttctccaactcagccc
gagctcaccagccttgtcggtgttgaccaacaaggtgataacatcggaccacgccaatcc
taccatcctcatcccattggaccgtttaatggaaaccagccaaaccttggttttcctgaa
tggcagcaaggttttgacgggggaatatggtcggattggtccaagccttctgatatgcac
aggcattcttcttctatttctccggctttatctcctcagccactcggctcatatggatca
tatggccagaacatacccatggggtcacagcgacagagatcattttacggttttggatct
ggttcgaactcttataacagaggttatatgcatagtggtggtcgtggccagggttctaac
tatggaagtagactaatttctaatgtgggtatgggaaaccaaggctggattggggttgac
aacagtcgagggcgtggaagggttagtgatccatctttgggtggtgcttataatggtact
tttgatatcctcaatgagcaaaatcgaggaccaagggcttcaaagcccaagactcaggtc
ttagaggagcttgattctgctgctgattctaagaaaaataacaaaggcagtgcaaaggag
cacgaggaatccaacaacgcagactttgtcaccgactacactaacgccaagttgttcatc
atcaagtcttacagtgaagacaatgttcacaaaagcatcaaatacaatgtatgggctagc
acccctaatggcaacaaaaagcttgacgctgcttatcgtgaggccaaggatgagaaagaa
ccgtgtccactttttcttctgttctcggtaaatgcgagctctcaattctgtggtgtagca
gagatggttggacctgttgattttgagaagagcgttgattactggcaacaagataaatgg
agtggacagttcccagtgaagtggcacattatcaaagatgttccaaacagccagttccgc
cacattatattggaaaacaatgacaataagcctgtgactaatagtcgagacacccaagaa
gtaaaactggaacagggcatcgagatgctgaagatcttcaagaactacgacgctgacacg
tcaatcttggatgatttcgggttttatgaagagcgggagaaaattatacaagaccggaag
gcaagaagacagccaagcttgccatctgcaggagtagtagcaggagaaaatgaacataaa
cctgcttctgctgcattacccacagacttcatgaagaacatgtccaagagttttgcgcaa
gttgtccgcttggacgaaggcagcaaagaagcagtcaaggccagttcatctccagatgca
attacaacagcagcagtctcttctggtcaatccaactag
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