Arabidopsis thaliana (thale cress): AT3G13170
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Entry
AT3G13170 CDS
T00041
Symbol
ATSPO11-1
Name
(RefSeq) Spo11/DNA topoisomerase VI, subunit A protein
KO
K10878
meiotic recombination protein SPO11
Organism
ath
Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ath03036
]
AT3G13170 (ATSPO11-1)
Chromosome and associated proteins [BR:
ath03036
]
Eukaryotic type
Meiosis-specific proteins
DSB formation-related proteins
AT3G13170 (ATSPO11-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TOP6A-Spo11_Toprim
TP6A_N
JetD_C
Motif
Other DBs
NCBI-GeneID:
820506
NCBI-ProteinID:
NP_187923
TAIR:
AT3G13170
UniProt:
Q9M4A2
A0A178VGV5
LinkDB
All DBs
Position
3:complement(4231395..4234206)
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AA seq
362 aa
AA seq
DB search
MEGKFAISESTNLLQRIKDFTQSVVVDLAEGRSPKISINQFRNYCMNPEADCLCSSDKPK
GQEIFTLKKEPQTYRIDMLLRVLLIVQQLLQENRHASKRDIYYMHPSAFKAQSIVDRAIG
DICILFQCSRYNLNVVSVGNGLVMGWLKFREAGRKFDCLNSLNTAYPVPVLVEEVEDIVS
LAEYILVVEKETVFQRLANDMFCKTNRCIVITGRGYPDVSTRRFLRLLMEKLHLPVHCLV
DCDPYGFEILATYRFGSMQMAYDIESLRAPDMKWLGAFPSDSEVYSVPKQCLLPLTEEDK
KRTEAMLLRCYLKREMPQWRLELETMLKRGVKFEIEALSVHSLSFLSEVYIPSKIRREVS
SP
NT seq
1089 nt
NT seq
+upstream
nt +downstream
nt
atggagggaaaattcgctatttcagaatcgactaatttgcttcaaaggatcaaagatttt
actcaatcggtcgttgtagatctggctgaaggaagatctccaaaaatttccatcaatcaa
ttcaggaactattgcatgaatccagaagctgattgcttatgcagctctgataaaccaaag
ggtcaggaaattttcactcttaagaaggaaccacaaacctacagaatcgatatgttgcta
agagtattgttgatagtccaacaacttctgcaagaaaatagacatgcttcgaaaagagat
atctactacatgcatccatcagctttcaaagcacaatccattgtggaccgtgcaattggt
gatatatgcattctttttcagtgtagtcggtacaacttgaatgtggtttctgttggaaac
gggttggtgatgggttggttaaaatttagggaagctggaaggaaatttgattgtttaaac
agcttgaacactgcatatcccgttcctgttcttgtagaggaagtcgaagatattgttagc
ttagctgagtacatactggttgtggaaaaagaaacagtattccagcgtttagcaaatgac
atgttttgcaagacgaaccgctgcattgttatcacaggaagaggatatccagatgtctca
acaagaaggttcttgcgactcctgatggagaagttgcatctacctgtgcattgtctagtc
gactgtgatccatatggctttgagatcctagccacataccgttttggctccatgcaaatg
gcctatgatattgaatcattacgagcaccagatatgaaatggttgggagcttttccttca
gactctgaggtatatagtgttcccaaacagtgtcttttgccactgacagaagaagataag
aaaagaactgaagcaatgttgcttagatgctacctgaagcgtgaaatgccacaatggagg
ttggaacttgaaacgatgttgaaaagaggggtcaagtttgagatcgaagcactctcagtt
cactcactgtcctttttgtcagaggtatatattccttctaagattcgtcgtgaagtaagc
tctccttga
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