KEGG   Arabidopsis thaliana (thale cress): AT3G13224
Entry
AT3G13224         CDS       T00041                                 
Name
(RefSeq) RNA-binding (RRM/RBD/RNP motifs) family protein
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
ath  Arabidopsis thaliana (thale cress)
Pathway
ath03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ath00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    AT3G13224
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ath03019]
    AT3G13224
   03041 Spliceosome [BR:ath03041]
    AT3G13224
Messenger RNA biogenesis [BR:ath03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     AT3G13224
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     AT3G13224
Spliceosome [BR:ath03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    AT3G13224
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_PARP14_3 OB_RNB BRAP2
Other DBs
NCBI-GeneID: 820515
NCBI-ProteinID: NP_001327772
TAIR: AT3G13224
UniProt: A0A1I9LTC4
LinkDB
Position
3:4254726..4257409
AA seq 349 aa
MFCLEFLCCRKIFIGGLHKDTTNTVFNKHFGKYGEITDSVIMRDRHTGQPRGFGFITFAD
PSVVDKVIEDTHVINGKQVEIKRTIPKGAGGNQSKDIKTKKIFVGGIPSTVTEDELKDFF
AKYGNVVEHQVIRDHETNRSRGFGFVIFDSEEVVDELLSKGNMIDMADTQVEIKKAEPKK
SLNRSPPSYGSHPRGRSSNDSYASYGGPYGGFDGGYGHPPGPIRSHGGPASRYAGGYGYG
RGSVGPEFGGGYNNYGGGSLGGYRNEPPLGYSSRFGPYGSGFGGEGYGRGGEGAYLGYPR
GGGEGYGGYGGPGYGGAYESGGPGGSYEGAGGPYGRGYSSSSRYHPYAR
NT seq 1050 nt   +upstreamnt  +downstreamnt
atgttttgcttggaatttttgtgttgcaggaaaatattcattggaggattgcacaaagac
acgactaatactgtgttcaataagcactttggcaagtacggggagattacagattctgtc
attatgcgagatcgacatactggacaacctaggggtttcggtttcatcaccttcgctgac
ccttctgttgttgacaaagttatcgaagatactcatgtcatcaatggcaaacaggttgag
atcaaaaggactattccgaaaggtgctggtggcaatcagtcaaaggacatcaaaacaaag
aagattttcgttggtggtataccctcaacggttacagaagatgaacttaaggacttcttt
gccaagtatgggaacgtggtggagcaccaggttattcgagaccatgaaacaaacaggtcc
agaggttttggttttgtaatttttgatagcgaagaagtcgtagatgaattattgtccaaa
ggaaacatgatcgatatggcagacactcaggtggagatcaagaaagctgaaccaaagaaa
tctctaaaccgttcacctccttcttacggtagtcaccctagaggtcgttcttctaacgat
agttatgcaagttatggtggaccttacggaggttttgatggagggtatggtcatcctcca
ggtcccattaggtcacatggaggtcctgctagtagatatgctgggggatatgggtatggt
cgtggcagtgtaggccctgaatttggaggaggttataataattatgggggtggtagttta
ggaggttaccggaatgaaccaccccttggctattctagtcgttttggaccctatgggagt
gggtttggtggtgagggatatggccgtggaggagaaggagcctatttgggatatcctcgt
ggaggaggggaaggctatgggggatatggtgggcctggttacggcggtgcatatgaatct
ggtggcccaggtggcagttatgaaggagcaggtggtccatatgggaggggttatagtagc
agtagtcgataccatccgtatgcaaggtag

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