Arabidopsis thaliana (thale cress): AT3G13290 Help Entry AT3G13290         CDS       T00041                                  Symbol VCR Name (RefSeq) varicose-like protein   KO K12616   enhancer of mRNA-decapping protein 4 Organism ath  Arabidopsis thaliana (thale cress) Pathway ath03018   RNA degradation Brite KEGG Orthology (KO) [BR:ath00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     AT3G13290 (VCR)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:ath03019]     AT3G13290 (VCR) Messenger RNA biogenesis [BR:ath03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     P-body specific factors      AT3G13290 (VCR)   mRNA degradation factors    5'-3' decay     Decapping complex      AT3G13290 (VCR) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Ge1_WD40 EDC4_C WD40_WDHD1_1st WD40 WD40_CDC20-Fz WD40_Prp19 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_RIG_2nd WD40_MABP1-WDR62_2nd WDR55 Beta-prop_EML_2 EIF3I Beta-prop_TEP1_C Beta-prop_Vps41 HAM1_C Motif Other DBs NCBI-GeneID:  820529 NCBI-ProteinID:  NP_187937 TAIR:  AT3G13290 UniProt:  Q9LTT9 LinkDB All DBs Position 3:4297282..4303634 Genome browser AA seq 1340 aa AA seqDB search MASSPGNTNPHNPPPFDLGTIFKPSSNPYPPPTGPFLNNQYNQQLYAPPGIAAQPSPVNQ TQQDVSSSSSATNLQPQRTLSYPTPPLNPQSPRVNHNPGTHILALLNNGGAVANQEPSHH NEIARAFPGGSGPIHVPSGKMPKGRRLVGEHAVYDVDVRLQGEIQPQLEVTPITKYGSDP QLVLGRQIAVNKVYICYGLKGGSIRVLNINTALRSLFRGHSQRVTDMAFFAEDVHLLASV SLDGKVFVWKISEGSEGDEQSQITGKIVVALQILGEEDTKHPRVCWHCHKQEILVVSIGK HVLRIDTTKVGRGEVFSAEAPLQCHLDKLIDGVQIVGKHDGEVTDLSMCQWMTTRLVSSS VDGTVKIWQDRKTQPLVVLRPHDGLPVNSAIFVTSPERPDHIILITGGPLNREIKIWVSA GEEGWLLPADTESWRCTQTLDLKSSTEPQAEKAFFNQVIALSEAGLLLLANARRNAIYSV HLDYGSSPVETLMDYLSEFTVTMPILSFIGTNDHPEEPFVKVYCVQTLAIQQYTLDLFLC MPPPRENVGFEKSDSTVSREANLVESTLETSGMKPTELPSVGSVPKPSILVNRSENANML SFPAGPASAGITPPAIVPPNGEPKTSGMPSETSDVDSAYAPSPQLPLSPRLSSKLSGYHT PVEAFEQVLPHHKLGGKTSSADYFYVRQTDDVGGRNLDVSSVEENCRSKDTNVTPDDDVS GIRSPSAFFKQPTHLVTPSEILMGVSSTEASITTEDKRDRDANIEEVNNDARGLEVELKE VGEAQTSQNGEINYHETTENHTSESRENIFCSQASNLSTEMARDRHPITEGSAIPGDSMA YGQPLQAGDERGLDSRDVSAKLPESGSSSGLVATNSKGKKQKAKNSQGPGLSSTSSNVAN LADSFNEQSQSLNHPMADLLPQLLALQETMTQVMASQKEMQRQLSNAVTGPIVKEGKKLE VALGRMIEKSSKSNADALWAHFQEEAVKNEKALRDHGQQIMNETTNFTSKELNAMFEKTM KKEFASVGPTLARVVTPVIEKTVSSAITESFQRGIGDKAVNQLEKSVNSKLETTVARQIQ AQFQTSGRQVLQEGLRSSMESSVIPSFERSCKTMFEQVDSTLQKGIGKHTSATQQRIDSG QSQLAHTLRETISSASSVTQALNRELAESQRNRLALTAAGSNPLVTQLSNGPLGALLEKV EAPMDPTTELSRLISERKYEESFTSALQRSDVSIVSWLCSQVDLRGLLAMNPLPLSQGVL LSLLQQLACDISTDTSRKLGWMTDVVTAINPSDQMIAVHARPIFEQVYQILHHHRNAPGS DVSAVRLIMHVINSLLMSCK NT seq 4023 nt NT seq  +upstreamnt  +downstreamnt atggcgtcttcacctggtaacactaaccctcacaatcctccgccgttcgatctcggtact atcttcaaaccctcatccaacccttatcctccccctacaggtccgtttcttaacaaccag tacaatcagcaactatacgcgccgcctggtatcgccgcccaaccatctccggtgaatcaa acgcaacaggatgtgtcttcctcttcctccgctactaacttgcaaccacagagaacgcta tcttatcccacgccacctctcaatccccaatctccccgtgtcaatcacaatccgggaacg cacatcctcgctctcctcaacaacggaggtgccgtggcgaaccaagagccgtcgcatcac aacgagatcgctcgagcttttcccggcggttcgggtcctattcatgttccaagcggtaaa atgcccaagggaaggcgattggttggtgaacatgcggtgtatgatgttgatgtgagatta cagggagagattcaaccgcagctggaggtgactccgattaccaagtacggctcggatcct cagcttgtactcggtaggcaaattgctgtgaataaggtctacatttgctatggattgaaa ggaggaagcattcgtgttctcaatatcaacacagcattgaggtctctgttccgtggccat tctcagagagtaacggacatggctttctttgccgaagatgttcatctcttagctagtgtt agtctagatggaaaagtttttgtgtggaaaatttccgaaggatctgagggagatgaacaa tcccagataactggaaagatagttgttgctcttcagatacttggagaggaagacaccaaa catccacgtgtctgttggcactgccacaaacaggaaattttggtagtttcaattggtaaa catgtgctgcgaatcgatactacaaaagttggcagaggtgaagtgttctctgccgaggca cctctccagtgtcatcttgataaactaattgatggtgttcagattgtgggtaagcatgat ggagaagtgacagatttgtcaatgtgccaatggatgaccacgcgcctggtttcttcttca gttgatggcacggttaagatatggcaagatcgtaagacacaaccacttgtagtattgaga cctcatgatggacttccagtcaattctgccatatttgtgacatccccggaaagacctgat cacatcatacttatcacggggggtcctctaaatcgagaaatcaagatttgggtctccgct ggggaagaagggtggcttctacccgctgatactgaatcgtggagatgtacccagacactt gatttgaaaagttcaactgagccacaagctgaaaaggcatttttcaaccaagtcatagca ttgtctgaagcaggcctgcttttgcttgcaaatgcgagaaggaacgccatatattccgtg catttggactatggctcatctccagtggaaacgctgatggattacttgtccgagtttaca gtcactatgcctatattgagttttattgggacaaatgatcacccagaagaaccatttgtt aaagtgtattgtgttcagactctagcaatccagcagtatacattagacttattcttgtgc atgccacctccaagagagaatgtgggttttgagaagtcagattctactgtgtcacgggag gcaaaccttgttgaaagcacgttagaaacatctggaatgaagcctaccgaattaccttca gttggttcagtgcctaaaccatctattttagtgaatagatcggaaaatgctaatatgttg agttttccagcgggccctgcatcagcggggatcacaccaccagcaattgttccacccaac ggtgagcctaaaacttctgggatgccttctgagaccagtgatgtagattctgcgtatgct ccttcacctcaacttcctctaagccccagactatcaagtaaactttctggctatcacact cctgtagaagcgtttgagcaagtgctaccacatcataagcttggtggcaaaacaagttct gctgattatttttatgtgaggcaaactgatgatgttggaggaagaaatttggatgtgtct tctgtcgaggaaaactgtagaagcaaggacacgaatgttacacctgatgatgatgtgtct gggattcgaagcccgtcagcttttttcaaacagcccactcatctcgtaactccttcagag atattgatgggcgtttcttccactgaagcctccattactactgaagacaagagggataga gatgcaaatattgaggaagtgaataatgatgcaagaggcttagaagttgagttgaaagaa gtaggcgaagcacagacttcgcagaatggtgaaattaactatcacgaaacaactgagaat cacacttcagaaagtagagaaaatatcttctgctcacaggcttcaaatctcagcactgag atggcaagagaccgtcatcctattacagagggaagtgccattcctggggattctatggct tatggacaacctttacaagctggagatgaaaggggtcttgactcaagagatgtctctgca aagcttcctgagtcgggttcatctagtgggttagtagctacaaatagcaaaggaaagaag cagaaggcgaaaaattcacagggtcctgggttgtcatctacatcctcaaatgttgctaat ctggctgactccttcaatgagcaaagtcagagtttaaatcatcccatggcagatttactt cctcagttgttagcattgcaagaaacaatgactcaggtaatggcttcgcagaaggagatg cagagacaactatcaaatgctgtcactggccctatcgtaaaagaaggtaaaaaactagaa gttgccttagggagaatgattgagaaatccagcaagtcaaatgctgatgctctatgggcc cacttccaagaggaggctgttaagaatgaaaaggcattacgtgaccatggccagcaaatt atgaatgaaacgacaaacttcacgagtaaagagttaaatgccatgtttgagaaaacgatg aagaaggaatttgcttcagttggtccaaccctagcacgtgtagtaactccagttattgaa aaaactgtatcttctgcaatcacagagtccttccagagaggaattggtgacaaagcagtc aatcagcttgaaaaatctgttaattcaaagcttgaaacaaccgtagccaggcagattcaa gcccaatttcagacatctggcagacaagtcctgcaggaaggtcttaggtcaagtatggag tcctcagtcataccttcctttgagaggtcatgcaaaaccatgtttgagcaagtagactca accttacagaaaggaattggtaagcacacgagcgcaacacagcaacggattgactctgga caatctcagcttgctcatactctgagggaaaccattagttctgcatcatcagttactcaa gccctaaatcgtgaattagccgagagtcaaaggaatcgcttagctctcacagctgctgga tcaaatcccttggttactcaactaagtaacgggcctttaggtgctcttcttgaaaaggtt gaagcacctatggacccaacaacagagctatcaaggttgatatctgaacgcaagtacgaa gaatctttcacatcagctctacaaagaagcgatgtctctatagtatcatggctttgctca caggtggatcttcgtggactactggcgatgaatccgcttccgctgagccaaggtgtgctt ctttcactgctgcagcagttagcttgtgacataagcacggacacatcccgtaagctaggt tggatgactgatgtggttacagccataaacccatcagatcagatgatagcggtccatgct cgcccaatctttgaacaagtttatcagattttgcaccatcaccgtaacgcaccaggcagc gacgtctctgccgtcagactaataatgcacgtcatcaactctttacttatgagctgcaaa tga

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