KEGG   Arabidopsis thaliana (thale cress): AT3G13445
Entry
AT3G13445         CDS       T00041                                 
Symbol
TBP1
Name
(RefSeq) TATA binding protein 1
  KO
K03120  transcription initiation factor TFIID TATA-box-binding protein
Organism
ath  Arabidopsis thaliana (thale cress)
Pathway
ath03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:ath00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    AT3G13445 (TBP1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ath03000]
    AT3G13445 (TBP1)
   03021 Transcription machinery [BR:ath03021]
    AT3G13445 (TBP1)
Transcription factors [BR:ath03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   TATA-binding proteins
    AT3G13445 (TBP1)
Transcription machinery [BR:ath03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     AT3G13445 (TBP1)
  RNA polymerase III system
    TFIIIB
     AT3G13445 (TBP1)
  RNA polymerase I system
    SL1/TIF-1B
     AT3G13445 (TBP1)
SSDB
Motif
Pfam: TBP DUF3378 DUF4295
Other DBs
NCBI-GeneID: 820546
NCBI-ProteinID: NP_187953
TAIR: AT3G13445
UniProt: P28147
Structure
LinkDB
Position
3:4379793..4382224
AA seq 200 aa
MTDQGLEGSNPVDLSKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV
IMRIREPKTTALIFASGKMVCTGAKSEDFSKMAARKYARIVQKLGFPAKFKDFKIQNIVG
SCDVKFPIRLEGLAYSHAAFSSYEPELFPGLIYRMKVPKIVLLIFVSGKIVITGAKMRDE
TYKAFENIYPVLSEFRKIQQ
NT seq 603 nt   +upstreamnt  +downstreamnt
atgactgatcaaggattggaagggagtaatccagttgatcttagcaagcatccttcaggg
attgttcctactcttcaaaacattgtctccacggtgaacttagactgcaagctagatctt
aaagccatagctttgcaggctcggaatgctgaatataatcccaagcgttttgctgcggtg
ataatgaggatcagagaaccgaagactacagcattaatattcgcctcagggaaaatggtc
tgtactggagctaagagcgaggacttttcgaagatggctgctagaaagtatgctaggatt
gtgcagaaattgggattccctgcaaaattcaaggatttcaagattcagaatattgtaggt
tcttgtgatgtcaaattccctataagacttgaaggtcttgcttactctcacgctgctttc
tcaagttatgagcccgagctcttcccagggctgatttataggatgaaagtcccaaaaatc
gtccttctaatctttgtctctgggaagatcgtaataacaggagccaagatgagagatgag
acctacaaagcctttgagaatatataccccgtgctctcggaattcagaaagatacagcaa
tag

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