Arabidopsis thaliana (thale cress): AT3G13445
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Entry
AT3G13445 CDS
T00041
Symbol
TBP1
Name
(RefSeq) TATA binding protein 1
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
AT3G13445 (TBP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ath03000
]
AT3G13445 (TBP1)
03021 Transcription machinery [BR:
ath03021
]
AT3G13445 (TBP1)
Transcription factors [BR:
ath03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
AT3G13445 (TBP1)
Transcription machinery [BR:
ath03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
AT3G13445 (TBP1)
RNA polymerase III system
TFIIIB
AT3G13445 (TBP1)
RNA polymerase I system
SL1/TIF-1B
AT3G13445 (TBP1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TBP
DUF3378
DUF4295
Motif
Other DBs
NCBI-GeneID:
820546
NCBI-ProteinID:
NP_187953
TAIR:
AT3G13445
UniProt:
P28147
Structure
PDB
PDBj
LinkDB
All DBs
Position
3:4379793..4382224
Genome browser
AA seq
200 aa
AA seq
DB search
MTDQGLEGSNPVDLSKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV
IMRIREPKTTALIFASGKMVCTGAKSEDFSKMAARKYARIVQKLGFPAKFKDFKIQNIVG
SCDVKFPIRLEGLAYSHAAFSSYEPELFPGLIYRMKVPKIVLLIFVSGKIVITGAKMRDE
TYKAFENIYPVLSEFRKIQQ
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atgactgatcaaggattggaagggagtaatccagttgatcttagcaagcatccttcaggg
attgttcctactcttcaaaacattgtctccacggtgaacttagactgcaagctagatctt
aaagccatagctttgcaggctcggaatgctgaatataatcccaagcgttttgctgcggtg
ataatgaggatcagagaaccgaagactacagcattaatattcgcctcagggaaaatggtc
tgtactggagctaagagcgaggacttttcgaagatggctgctagaaagtatgctaggatt
gtgcagaaattgggattccctgcaaaattcaaggatttcaagattcagaatattgtaggt
tcttgtgatgtcaaattccctataagacttgaaggtcttgcttactctcacgctgctttc
tcaagttatgagcccgagctcttcccagggctgatttataggatgaaagtcccaaaaatc
gtccttctaatctttgtctctgggaagatcgtaataacaggagccaagatgagagatgag
acctacaaagcctttgagaatatataccccgtgctctcggaattcagaaagatacagcaa
tag
DBGET
integrated database retrieval system