Arabidopsis thaliana (thale cress): AT3G13470
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Entry
AT3G13470 CDS
T00041
Symbol
Cpn60beta2
Name
(RefSeq) TCP-1/cpn60 chaperonin family protein
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AT3G13470 (Cpn60beta2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ath03019
]
AT3G13470 (Cpn60beta2)
03110 Chaperones and folding catalysts [BR:
ath03110
]
AT3G13470 (Cpn60beta2)
03029 Mitochondrial biogenesis [BR:
ath03029
]
AT3G13470 (Cpn60beta2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ath04147
]
AT3G13470 (Cpn60beta2)
Enzymes [BR:
ath01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
AT3G13470 (Cpn60beta2)
Messenger RNA biogenesis [BR:
ath03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
AT3G13470 (Cpn60beta2)
Chaperones and folding catalysts [BR:
ath03110
]
Heat shock proteins
HSP60 / Chaperonin
AT3G13470 (Cpn60beta2)
Mitochondrial biogenesis [BR:
ath03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
AT3G13470 (Cpn60beta2)
Exosome [BR:
ath04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
AT3G13470 (Cpn60beta2)
Exosomal proteins of other body fluids (saliva and urine)
AT3G13470 (Cpn60beta2)
Exosomal proteins of breast cancer cells
AT3G13470 (Cpn60beta2)
Exosomal proteins of colorectal cancer cells
AT3G13470 (Cpn60beta2)
Exosomal proteins of bladder cancer cells
AT3G13470 (Cpn60beta2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
KH_PARP14_2
Motif
Other DBs
NCBI-GeneID:
820549
NCBI-ProteinID:
NP_187956
TAIR:
AT3G13470
UniProt:
Q9LJE4
LinkDB
All DBs
Position
3:4389215..4393015
Genome browser
AA seq
596 aa
AA seq
DB search
MASTFTATSSLGSLLAPNAIKLSSATSISSSSFGRRHNVCVRRSRPAIVCAAKELHFNKD
GTTIRKLQTGVNKLADLVGVTLGPKGRNVVLESKYGSPRIVNDGVTVAREVELEDPVENI
GAKLVRQAAAKTNDLAGDGTTTSVVLAQGFIAEGVKVVAAGANPVLITRGIEKTAKALVN
ELKLMSKEVEDSELADVAAVSAGNNHEVGSMIAEAMSKVGRKGVVTLEEGKSAENNLYVV
EGMQFDRGYISPYFVTDSEKMSVEYDNCKLLLVDKKVTNARDLVGVLEDAIRGGYPILII
AEDIEQEALATLVVNKLRGTLKIAALKAPGFGERKSQYLDDIAILTGATVIREEVGLSLD
KAGKEVLGNASKVVLTKEMTTIVGDGTTQEAVNKRVVQIRNLIEQAEQDYEKEKLNERIA
KLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCTLLRLASKVDAIK
DTLENDEEKVGAEIVKRALSYPLKLIAKNAGVNGSVVSEKVLANDNVKFGYNAATGKYED
LMAAGIIDPTKVVRCCLEHAASVAKTFLMSDCVVVEIPEPEPVPAGNPMDNSGYGY
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atggcatcgacattcactgccacgtcttcccttggttcgttgcttgctcccaatgctatc
aagttgtcttctgcgactagcatctcttcaagctcgtttggaaggagacataacgtgtgc
gtcagaagatcccgtcctgccatagtatgtgcagccaaggagttgcatttcaataaggat
gggactaccataaggaaacttcagactggtgttaacaagctcgcggaccttgttggtgtc
acacttggaccaaaagggagaaatgttgttcttgagagcaagtatggatccccaagaatt
gttaatgatggtgtcactgttgcgagggaggtcgagttggaggacccggttgagaacatt
ggtgcaaagcttgtaaggcaagcagctgcaaagaccaatgacttggctggtgacggtaca
acaacatctgttgttcttgcacaaggttttattgctgagggtgtcaaggtggtggctgca
ggtgcgaaccctgtattgatcactagggggattgagaagactgcaaaggctttggttaac
gagctgaaacttatgtctaaggaggttgaagacagtgaacttgctgatgtggcagctgtt
agtgcgggtaataaccacgaagttggaagtatgattgctgaagcaatgagcaaagtgggc
aggaagggtgtggtgaccctggaggagggaaaaagcgctgagaacaacctttatgttgtg
gaaggaatgcaatttgaccgtggttatatctccccatactttgtgacagacagtgagaaa
atgtctgttgagtatgacaattgcaagttgcttcttgttgacaagaaagtaaccaatgca
agggatcttgttggggttctagaggatgcgattagaggcggatacccaatcctcataatt
gcagaagatattgaacaagaagccttagctactcttgttgttaacaagcttagaggcaca
ctgaagattgcagctctcaaagctcctggatttggagagcgcaagagccaataccttgac
gatattgccattctaactggagcaactgtgatcagagaggaagttggtctttctcttgac
aaagctggaaaagaggttctgggtaacgcttccaaggttgtcctgacaaaggaaatgaca
acaattgtgggtgatgggaccacacaagaagcagtgaacaagcgtgttgtacagattagg
aatcttattgagcaagcggagcaagactacgagaaggaaaaattaaatgagagaattgcg
aagctctctggtggagttgctgtaattcaggttggagctcaaactgagacagagctcaaa
gaaaagaagctgagagtggaagatgctcttaatgctacaaaggctgctgttgaggaaggt
attgtcgttggtggtggttgcactctgctccggcttgcatcaaaggtcgatgccatcaag
gatacccttgaaaatgatgaagaaaaggttggagcggaaattgttaaaagagcactgagt
taccctctgaaattgatagctaagaatgctggtgttaatggaagtgttgtcagcgagaag
gtgctggctaacgataatgtgaaatttggatacaatgctgcaaccggcaagtatgaagac
ctgatggctgcaggcatcatcgacccgacaaaggttgtgagatgttgcttagaacatgcc
gcctcagttgcaaagacgttcttgatgtctgactgtgtggttgttgagatcccagagcca
gagccagttcctgctggtaacccaatggacaactcaggttatggatactaa
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