Arabidopsis thaliana (thale cress): AT3G13672
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Entry
AT3G13672 CDS
T00041
Name
(RefSeq) TRAF-like superfamily protein
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
AT3G13672
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ath04121
]
AT3G13672
Enzymes [BR:
ath01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
AT3G13672
Ubiquitin system [BR:
ath04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
AT3G13672
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
FAIM1
Motif
Other DBs
NCBI-GeneID:
820573
NCBI-ProteinID:
NP_187978
TAIR:
AT3G13672
UniProt:
Q93WE4
A0A178V5T3
LinkDB
All DBs
Position
3:complement(4472562..4474378)
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AA seq
216 aa
AA seq
DB search
MEPRINDLQVESRVHELLDFPVHTNQISSAIYECPNDHIENPKKKPYNCPHSGAKCDVTG
DIQRLLLHLRNDHNVEMSDGRSFSHRYVHHDPKHLHHATWMLTLLDCCGRKFCLYFEAFH
LRKTPMYMAFMQFMGDEEEAMSFSYSLQVGGNGRKLTWQGVPRSIRDSHKTVRDSQDGLI
ITRKLALFFSTDNNTTDKELKLKVSGRVWREQPVSI
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atggaacctcgaatcaatgaccttcaggtggaatctcgggttcatgagttgctcgatttt
ccggttcatacaaaccagatatcctctgcaatctacgagtgtcccaacgaccacatcgaa
aaccctaagaagaaaccgtacaattgtccacactcaggagccaagtgtgatgtcacagga
gatattcaaaggctactactgcatctaaggaatgatcacaatgttgaaatgagtgatggg
cgtagtttcagtcacagatatgttcatcatgatcctaaacatcttcatcatgctacttgg
atgttaacacttctcgattgttgtggtcgaaaattctgcttgtacttcgaagcgtttcac
ctgaggaaaacaccaatgtacatggccttcatgcagtttatgggagatgaagaagaggca
atgagcttcagctatagtttgcaggtcggagggaatggcagaaagctgacatggcaaggc
gtgccgaggagcattcgtgacagtcacaagacggttcgtgatagtcaagatggcttaatc
atcactcgcaaattggctttgttcttctctaccgacaacaacaccaccgacaaggagctg
aagttgaaggtttcaggtcgtgtatggagagaacagcctgtttcgatatga
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