Arabidopsis thaliana (thale cress): AT3G13920
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Entry
AT3G13920 CDS
T00041
Symbol
EIF4A1
Name
(RefSeq) eukaryotic translation initiation factor 4A1
KO
K03257
translation initiation factor 4A
Organism
ath
Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ath03019
]
AT3G13920 (EIF4A1)
03012 Translation factors [BR:
ath03012
]
AT3G13920 (EIF4A1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ath04147
]
AT3G13920 (EIF4A1)
Messenger RNA biogenesis [BR:
ath03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
AT3G13920 (EIF4A1)
mRNA cycle factors
Stress granule specific factors
AT3G13920 (EIF4A1)
Translation factors [BR:
ath03012
]
Eukaryotic type
Initiation factors
eIF-4
AT3G13920 (EIF4A1)
Exosome [BR:
ath04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
AT3G13920 (EIF4A1)
Exosomal proteins of bladder cancer cells
AT3G13920 (EIF4A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
AAA_22
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
820605
NCBI-ProteinID:
NP_566469
TAIR:
AT3G13920
UniProt:
P41376
A0A178V707
LinkDB
All DBs
Position
3:complement(4592248..4595080)
Genome browser
AA seq
412 aa
AA seq
DB search
MAGSAPEGTQFDARQFDQKLNEVLEGQDEFFTSYDDVHESFDAMGLQENLLRGIYAYGFE
KPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDFSLIQCQALVLAPTRELA
QQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLKRQSLRAD
NIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMSKPVRI
LVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRS
RDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPE
NYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVVEELPSNVADLL
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atggcaggatctgcaccagaaggcacacagtttgatgcacgtcagtttgaccagaaactc
aatgaagtacttgagggacaagatgagttcttcacatcctatgatgatgttcatgagagc
tttgatgccatgggtcttcaagagaaccttctcaggggtatttatgcttatggttttgag
aagccttctgctattcagcaaagaggaatcgtccccttctgtaagggtcttgatgtgatt
caacaggctcagtctggtactgggaaaacagcaactttctgctctggtgtcttgcagcag
ctggacttctcccttatccagtgtcaggctttggttctagctccaactagagagcttgct
cagcaaattgagaaggtcatgagggcccttggtgattaccttggtgtcaaggttcacgcc
tgtgttggtggaaccagtgtccgtgaggatcagcgcatcctccaagctggtgtccatgtt
gttgttggaactccagggcgtgtctttgacatgttgaagaggcagtctcttcgtgctgac
aacatcaagatgtttgttctcgatgaagctgatgaaatgctctcccgtggtttcaaggac
cagatctatgacatattccagcttcttccaccaaagatccaagttggtgtgttctccgca
acaatgccaccagaagctcttgagatcacaaggaagttcatgagcaagccagtgagaatc
ttggtgaagcgtgatgagcttacccttgaaggtatcaagcagttctacgtcaacgttgag
aaagaagagtggaagctcgagacactctgtgatctctacgagactcttgccatcactcag
agtgtcatcttcgtgaacaccaggcgtaaggttgattggctcacagacaaaatgagaagc
cgtgaccacacagtctctgcaactcacggagacatggaccagaacaccagggacatcatc
atgagagagttcaggtctggttcctcccgtgttctcatcaccactgacctcttagctcgt
ggtattgatgtccaacaagtctccctggttatcaacttcgatctcccaactcagccagag
aactaccttcaccgtatcggaagaagtggaaggttcgggagaaagggtgttgcgatcaat
ttcgtgacccgtgatgatgagaggatgctgtttgatattcagaaattctacaatgtggtt
gtcgaagagctgccttcgaacgtggccgatctgctgtga
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