Arabidopsis thaliana (thale cress): AT3G13970
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Entry
AT3G13970 CDS
T00041
Symbol
APG12B
Name
(RefSeq) Ubiquitin-like superfamily protein
KO
K08336
ubiquitin-like protein ATG12
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
AT3G13970 (APG12B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ath04131
]
AT3G13970 (APG12B)
04121 Ubiquitin system [BR:
ath04121
]
AT3G13970 (APG12B)
03029 Mitochondrial biogenesis [BR:
ath03029
]
AT3G13970 (APG12B)
Membrane trafficking [BR:
ath04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
AT3G13970 (APG12B)
Ubiquitin system [BR:
ath04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitin-like proteins (UBLs)
AT3G13970 (APG12B)
Mitochondrial biogenesis [BR:
ath03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
AT3G13970 (APG12B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
APG12
ATG8
Motif
Other DBs
NCBI-GeneID:
820611
NCBI-ProteinID:
NP_188013
TAIR:
AT3G13970
UniProt:
Q9LVK3
A0A178VDM5
Structure
PDB
PDBj
LinkDB
All DBs
Position
3:complement(4613492..4614857)
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AA seq
94 aa
AA seq
DB search
MATESPNSVQKIVVHLRATGGAPILKQSKFKVSGSDKFANVIDFLRRQLHSDSLFVYVNS
AFSPNPDESVIDLYNNFGFDGKLVVNYACSMAWG
NT seq
285 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccgaatctccgaattctgttcagaaaattgttgttcatctgcgagctactggt
ggtgctccgatactgaaacaatctaaattcaaggtttcagggagtgacaagtttgctaac
gtgattgattttctaagacggcagcttcactctgactcattgtttgtttatgtgaacagc
gctttctcgccaaacccggatgaatcagtaattgatctatacaataactttgggtttgat
ggtaaactggtggtgaactatgcttgttccatggcatggggttaa
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