Arabidopsis thaliana (thale cress): AT3G14040
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Entry
AT3G14040 CDS
T00041
Name
(RefSeq) Pectin lyase-like superfamily protein
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath00040
Pentose and glucuronate interconversions
ath01100
Metabolic pathways
Module
ath_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
AT3G14040
Enzymes [BR:
ath01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
AT3G14040
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
820618
NCBI-ProteinID:
NP_188020
TAIR:
AT3G14040
UniProt:
Q9LVJ4
A0A384KJF4
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All DBs
Position
3:complement(4648236..4650319)
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AA seq
445 aa
AA seq
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MVGSHKASGVLLVLLVVMATTIANGTPVVDTAKNAATAVEDTAKNAATAVGGAAASVGAK
VTGAKPGGASLDVKASGAKGDGKTDDSAAFAAAWKEACAAGSTITVPKGEYLVESLEFKG
PCKGPVTLELNGNFKAPATVKTTKPHAGWIDFENLADFTLNGNKAIFDGQGSLAWKANDC
AKTGKCNSLPINIRFTGLTNSKINSITSTNSKLFHMNILNCKNITLTDIGIDAPPESLNT
DGIHIGRSNGVNLIGAKIKTGDDCVSIGDGTENLIVENVECGPGHGISIGSLGRYPNEQP
VKGVTVRKCLIKNTDNGVRIKTWPGSPPGIASNILFEDITMDNVSLPVLIDQEYCPYGHC
KAGVPSKVKLSDVTIKNIKGTSATKVAVKLMCSKGVPCTNIALSDINLVHNGKEGPAVSA
CSNIKPILSGKLVPAACTEVAKPGP
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atggtgggttctcacaaagcaagcggagtgcttcttgtgctactagtggttatggccacc
acaatagcaaacgggacacctgttgtcgatacagcaaaaaatgcagctacagcagttgaa
gatacagcaaaaaatgcagctacagcagttggcggtgcagctgcatcagttggtgctaaa
gtaacaggtgccaaaccaggcggtgcatcacttgatgttaaagcatcaggagccaaagga
gacggcaaaactgatgatagtgcggcatttgcggctgcatggaaagaagcttgtgcagca
gggagcacgattacagtgccaaaaggtgagtatttggtagagagcctagagttcaaaggt
ccatgcaaaggtccagtcactttggaattgaatggcaattttaaggctccggctacggtc
aagaccactaagcctcatgccggatggattgatttcgaaaatctcgctgatttcactttg
aatggaaacaaagctatttttgacggtcaagggtccctcgcttggaaggccaatgactgc
gccaaaaccggcaaatgcaactctctccctatcaacatccgattcactggtctaacaaac
tcaaagattaacagtattacatcaacaaacagcaagcttttccacatgaacatccttaac
tgcaagaacataactcttacggatatcggtattgatgcacctccggagagtctcaacacc
gatggtatccacatcggaaggtccaatggagtcaacttaattggggcaaagattaaaacc
ggagatgactgcgtttccattggagatggtaccgaaaatctcattgttgagaacgtagaa
tgtggaccaggacacggaatttccattggaagtcttggaagataccctaatgaacaacca
gtaaaaggagtcaccgtgaggaaatgcctcatcaagaacactgacaatggtgttcgcatc
aagacatggccaggatctccccccggtatcgcctccaacattcttttcgaagatatcaca
atggacaatgttagccttcccgttctcatcgaccaagagtactgtccttatggccactgc
aaagctggggtaccatcgaaagtgaagttgtcagacgtgactatcaagaacattaaggga
acatcagcaacaaaggtagcagtgaagctaatgtgcagcaaaggcgttccttgcaccaat
attgctctctctgacatcaacttggtccacaacggcaaagagggaccagctgtctcagca
tgttctaacatcaagcctattctcagcggaaagttggttccagcggcttgcactgaagtc
gctaaaccgggtccttaa
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