KEGG   Arabidopsis thaliana (thale cress): AT3G15010
Entry
AT3G15010         CDS       T00041                                 
Name
(RefSeq) RNA-binding (RRM/RBD/RNP motifs) family protein
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
ath  Arabidopsis thaliana (thale cress)
Pathway
ath03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ath00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    AT3G15010
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ath03019]
    AT3G15010
   03041 Spliceosome [BR:ath03041]
    AT3G15010
Messenger RNA biogenesis [BR:ath03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     AT3G15010
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     AT3G15010
Spliceosome [BR:ath03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    AT3G15010
SSDB
Motif
Pfam: RRM_1 RRM_7
Other DBs
NCBI-GeneID: 820730
NCBI-ProteinID: NP_188119
TAIR: AT3G15010
UniProt: Q9LKA4 A0A178V7K4
LinkDB
Position
3:5052725..5056017
AA seq 404 aa
MDMMKKRKLDENGNGLNTNGGGTIGPTRLSPQDARKIIERFTTDQLLDLLQEAIVRHPDV
LESVRLTADSDISQRKLFIRGLAADTTTEGLRSLFSSYGDLEEAIVILDKVTGKSKGYGF
VTFMHVDGALLALKEPSKKIDGRVTVTQLAASGNQGTGSQIADISMRKIYVANVPFDMPA
DRLLNHFMAYGDVEEGPLGFDKVTGKSRGFALFVYKTAEGAQAALADPVKVIDGKHLNCK
LAVDGKKGGKPGMPQAQDGGSGHGHVHGEGMGMVRPAGPYGAAGGISAYGGYSGGPPAHH
MNSTHSSMGVGSAGYGGHYGGYGGPGGTGVYGGLGGGYGGPGTGSGQYRMPPSSMPGGGG
YPESGHYGLSSSAGYPGQHHQAVGTSPVPRVPHGGMYPNGPPNY
NT seq 1215 nt   +upstreamnt  +downstreamnt
atggatatgatgaagaagcgtaagctcgatgagaacggtaacggactcaataccaacggt
ggcggaaccattggtccaactcgattgtcgccgcaagacgcgaggaagattatcgagcga
ttcaccactgatcagctgctcgacttattgcaagaggctatcgtacgccatcccgacgtg
cttgaatctgtccgattaaccgccgactctgatatctcgcagcggaagctattcatccgt
ggtctcgcggcggatactactacggaaggtctccgttcgcttttttccagttacggagat
ctagaagaagctattgtgatccttgacaaggtcactgggaaatcgaaagggtatggtttc
gtcacttttatgcacgttgatggagctttactagctctgaaagaaccatctaagaaaatt
gatgggcgtgttacagtaacgcagctcgcggcatctggaaatcaaggtacgggttcccag
attgcagatatatcaatgaggaagatctatgtggcgaatgttccttttgatatgccggcg
gataggctattgaatcactttatggcttatggagatgttgaggaaggtcctttgggtttt
gataaggttactggtaaatctagaggctttgcattgtttgtctacaagacagcggaaggt
gcgcaggctgctcttgctgatccggtgaaggtgattgatggaaaacatttgaattgtaag
ttggctgttgatggtaagaaaggagggaagcctggaatgccacaagctcaagatggtggt
tctggtcatggacacgttcatggtgagggaatgggaatggtgcgtcctgcaggaccttat
ggtgcagctggtggtatcagtgcttatggtgggtactctggaggaccaccagcgcatcac
atgaattccacacactcctcaatgggtgttggttctgctgggtatggtggacactatggt
ggatatggaggtccaggtggtactggcgtctacggtggacttggcggtgggtatggtggg
cctggtactggaagtgggcagtatagaatgccaccaagttcgatgcctggtggtggtggt
tatcccgagagtgggcattacggtctttcatcatctgctgggtatcctggacagcatcat
caggctgttggaacgtcccctgtgccaagagttcctcatggcggaatgtaccccaacggt
ccaccaaactactga

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