Arabidopsis thaliana (thale cress): AT3G16320
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Entry
AT3G16320 CDS
T00041
Symbol
CDC27a
Name
(RefSeq) Tetratricopeptide repeat (TPR)-like superfamily protein
KO
K03350
anaphase-promoting complex subunit 3
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
AT3G16320 (CDC27a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ath01009
]
AT3G16320 (CDC27a)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ath04121
]
AT3G16320 (CDC27a)
03036 Chromosome and associated proteins [BR:
ath03036
]
AT3G16320 (CDC27a)
Protein phosphatases and associated proteins [BR:
ath01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-5
PP5-interacting proteins
AT3G16320 (CDC27a)
Ubiquitin system [BR:
ath04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Other subunits
AT3G16320 (CDC27a)
Chromosome and associated proteins [BR:
ath03036
]
Eukaryotic type
Sister chromatid separation proteins
APC/C complex
AT3G16320 (CDC27a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
ANAPC3
TPR_2
TPR_8
TPR_12
TPR_17
TPR_19
TPR_14
TPR_11
TPR_CcmH_CycH
TPR_16
TPR_9
ARM_TT21_2nd
ARM_TT21_C
TPR_15
DUF7017
NatA_aux_su
SRP_TPR_like
ChAPs
HrpB1_HrpK
ANAPC8
Motif
Other DBs
NCBI-GeneID:
820879
NCBI-ProteinID:
NP_188253
TAIR:
AT3G16320
UniProt:
Q06AN9
LinkDB
All DBs
Position
3:5529313..5534734
Genome browser
AA seq
717 aa
AA seq
DB search
MMENLLANCVQKNLNHFMFTNAIFLCELLLAQFPSEVNLQLLARCYLSNSQAYSAYYILK
GSKTPQSRYLFAFSCFKLDLLGEAEAALLPCEDYAEEVPGGAAGHYLLGLIYRYSGRKNC
SIQQFRMALSFDPLCWEAYGELCSLGAAEEASTVFGNVASQRLQKTCVEQRISFSEGATI
DQITDSDKALKDTGLSQTEHIPGENQQDLKIMQQPGDIPPNTDRQLSTNGWDLNTPSPVL
LQVMDALPPLLLKNMRRPAVEGSLMSVHGVRVRRRNFFSEELSAEAQEESGRRRSARIAA
RKKNPMSQSFGKDSHWLHLSPSESNYAPSLSSMIGKCRIQSSKEATTSGQSVSDIGSSVD
DEEKSNPSESSPDRFSLISGISEVLSLLKILGDGHRHLHMYKCQEALLAYQKLSQKQYNT
HWVLMQVGKAYFELQDYFNADSSFTLAHQKYPYALEGMDTYSTVLYHLKEEMRLGYLAQE
LISVDRLSPESWCAVGNCYSLRKDHDTALKMFQRAIQLNERFTYAHTLCGHEFAALEEFE
DAERCYRKALGIDTRHYNAWYGLGMTYLRQEKFEFAQHQFQLALQINPRSSVIMCYYGIA
LHESKRNDEALMMMEKAVLTDAKNPLPKYYKAHILTSLGDYHKAQKVLEELKECAPQESS
VHASLGKIYNQLKQYDKAVLHFGIALDLSPSPSDAVKIKAYMERLILPDELVTEENL
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgatggagaatctactggcgaattgtgtccagaaaaaccttaaccattttatgttcacc
aatgctatcttcctttgcgaacttcttctcgcccaatttccatctgaggtgaacctgcaa
ttgttagccaggtgttacttgagtaacagtcaagcttatagtgcatattatatccttaaa
ggttcaaaaacgcctcagtctcggtatttatttgcattctcatgctttaagttggatctt
cttggagaggctgaagctgcattgttgccctgtgaagattatgctgaagaagttcctggt
ggtgcagctgggcattatcttcttggtcttatatatagatattctgggaggaagaactgt
tcaatacaacagtttaggatggcattgtcatttgatccattgtgttgggaagcatatgga
gaactttgtagtttaggtgccgctgaagaagcctcaacagttttcgggaatgttgcttcc
cagcgtcttcagaaaacttgtgtagaacaaagaataagcttctcagaaggagcaaccata
gaccagattacagattctgataaggccttaaaagatacaggtttatcgcaaacagaacac
attccaggagagaaccaacaagatctgaaaattatgcagcagcctggagatattccacca
aatactgacaggcaacttagtacaaacggatgggacttgaacacaccttctccagtgctt
ttacaggtaatggatgctctaccgcctctgcttcttaagaatatgcgtcgtccagcagtg
gaaggatctttgatgtctgtacatggagtgcgtgtgcgtcgaagaaacttttttagtgaa
gaattgtcagcagaggctcaagaagaatctgggcgccgccgtagtgctagaatagcagca
aggaaaaagaatcctatgtcgcagtcatttggaaaagattcccattggttacatctttca
ccttccgagtcaaactatgcaccttctctttcctcgatgattggaaaatgcagaatccaa
agcagcaaagaagcaacgacgtcaggccagtctgtaagtgacattggaagctctgttgat
gatgaggaaaagtcaaatcctagtgaatcttccccggatcgtttcagccttatttctgga
atttcagaagtgctaagccttctgaaaattcttggagatggccacaggcatttacatatg
tacaagtgtcaggaagctttgttggcatatcaaaagctatctcagaaacaatacaataca
cactgggttctcatgcaggttggaaaagcatattttgagctacaagactacttcaacgct
gactcttcctttactcttgctcatcaaaagtatccttatgctttggaaggaatggataca
tactccactgttctttatcacctgaaagaagagatgaggttgggctatctggctcaggaa
ctgatttcagttgatcgcctgtctccagaatcctggtgtgcagttgggaactgttacagt
ttgcgtaaggatcatgatactgctctcaaaatgtttcagagagctatccaactgaatgaa
agattcacatatgcacataccctttgtggccacgagtttgccgcattggaagaattcgag
gatgcagagagatgctaccggaaggctctgggcatagatacgagacactataatgcatgg
tacggtcttggaatgacctatcttcgtcaggagaaattcgagtttgcgcagcatcaattt
caactggctctccaaataaatccaagatcttcagtcatcatgtgttactatggaattgct
ttgcatgagtcaaagagaaacgatgaggcgttgatgatgatggagaaggctgtactcact
gatgcaaagaatccgctccccaagtactacaaggctcacatattaaccagcctaggtgat
tatcacaaagcacagaaagttttagaagagctcaaagaatgtgctcctcaagaaagcagt
gtccatgcatcgcttggcaaaatatacaatcagctaaagcaatacgacaaagccgtgtta
catttcggcattgctttggatttaagcccttctccatctgatgctgtcaagataaaggct
tacatggagaggttgatactaccagacgagctggtgacggaggaaaatttgtag
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