Arabidopsis thaliana (thale cress): AT3G18060
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Entry
AT3G18060 CDS
T00041
Name
(RefSeq) transducin family protein / WD-40 repeat family protein
KO
K24736
WD repeat-containing protein 1 (actin-interacting protein 1)
Organism
ath
Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ath04990
]
AT3G18060
Domain-containing proteins not elsewhere classified [BR:
ath04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
AT3G18060
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_WDR3_1st
Beta-prop_THOC3
Beta-prop_IFT122_1st
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_EML
Beta-prop_TEP1_2nd
Beta-prop_WDR3_2nd
Beta-prop_CAF1B_HIR1
EIF3I
WDR55
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_2nd
Beta-prop_Aladin
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
NBCH_WD40
Beta-prop_WDR35_TULP_N
Beta-prop_IFT140_1st
CFAP251_N
Tricorn_2nd
Beta-prop_WDR19_1st
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
Beta-prop_Vps41
Beta-prop_NUP159_NUP214
DSE1_N
Beta-prop_HPS5
Beta-prop_NOL10_N
YJR039W_M
Motif
Other DBs
NCBI-GeneID:
821331
NCBI-ProteinID:
NP_188434
TAIR:
AT3G18060
UniProt:
Q9LV35
A0A5S9XDE7
LinkDB
All DBs
Position
3:6183612..6187151
Genome browser
AA seq
609 aa
AA seq
DB search
MELSETYACVPSTERGRGILISGNSKSDTILYTNGRSVVTLDLNNPLKVSIYGEHAYPAT
VARYSPNGEWIASGDVSGTVRIWGAYNDHVLKNEFKVLAGRIDDLQWSADGMRIVASGDG
KGKSLVRAFMWDSGSNVGEFDGHSRRVLSCAIKPTRPFRIVTCGEDFLVNFYEGPPFKFK
LSSREHSNFVNCVRFAPDGSKFITVSSDKKGIIYDGKTCEILGELSSDDGHKGSIYAVSW
SPDGKQVLTVSADKSAKIWDISDNGSGSLNTTLNCPGSSGGVDDMLVGCLWQNDHIVTVS
LGGTISIFSASDLDKSPFQFSGHMKNVSSLAVLKGNADYILSGSYDGLICKWMLGRGFCG
KLQRTQNSQIKCFAAHEEEIVTSGYDNKISRISYKDDQCTNEESIDIGNQPKDLSLAPLS
PDLLLVTFESGVVFLRDGKVVSTINLGFIVTALAVTPDGTEAVIGGQDGKLHLYSINGDS
LTEEAVLERHRGAISVIRYSPDLSMFASADLNREAVVWDRVSREMKLKNMLYHSARINCL
AWSPNSTMVATGSLDTCVIVYEVDKPASSRMTIKGAHLGGVYGLGFADDSHVVSSGEDAC
IRVWSFTPQ
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atggagctttcagaaacctatgcttgtgttccatcgacggagagaggtagaggaattctg
atctctggtaactcgaagtccgataccatcctctacactaatggtcgatccgtcgtgact
ctcgaccttaacaatcctttaaaggtctctatctatggtgagcacgcttacccagctact
gtggcgcgatattctccgaacggagagtggatcgcgtctggtgatgtgtcggggactgtt
agaatctggggagcttacaacgatcatgtgttgaagaatgagtttaaggttttggctggt
cggatcgatgatcttcagtggtctgctgatgggatgaggatcgttgcttctggtgatggc
aaaggcaaatctcttgttcgtgctttcatgtgggattcaggatcaaatgtgggagagttt
gatggtcattctaggagagttcttagctgtgctatcaagccaactaggccgttccgtatt
gtaacttgtggggaggattttctggtgaatttctatgaaggtcctccttttaagttcaag
ctctcaagcagagagcattccaactttgtcaactgtgtgaggtttgcaccagatggaagt
aagttcattactgtgagttcagataagaagggaatcatatatgatggaaagacttgtgag
atactgggagaactgtcttctgatgatgggcataaaggtagcatctatgcagtcagctgg
agtcctgatggtaaacaggtgctcactgtttccgcagacaagtcagccaaaatatgggat
atatcagacaacggtagtggatcattgaatacaacattgaactgtcctggatcatcaggt
ggagtagacgatatgcttgttgggtgtctgtggcagaacgatcatattgtcactgtttct
ctaggtggcacaatcagcatattctcagcaagcgatctggataaatccccctttcagttt
tcgggacacatgaagaacgtctcttccttagctgtgcttaaaggaaacgctgattacata
ttatccggtagttatgatggactgatatgtaaatggatgctaggccgtggtttttgcggt
aaattgcagcggacacaaaactctcaaataaagtgctttgctgcccatgaagaagagatc
gtgacctctggatatgacaataagatatccaggatctcctataaagatgatcaatgcaca
aatgaagagtctatcgacattggaaatcaaccaaaggatctaagccttgcaccactctca
cccgatctccttctggtgacctttgagtcaggagttgtgtttcttcgtgatgggaaagta
gtgtcaaccatcaaccttgggttcattgtcactgctttggcagtaacacctgatggaacc
gaagctgtcatcggtggccaagacggtaaactccatttgtattctattaatggtgactcc
ctcaccgaggaagcagttctcgagagacacagaggcgccatcagcgtcatacgttactct
ccagatttgtctatgtttgcatcagctgatttgaacagagaagcagttgtgtgggacaga
gtctccagagagatgaaactcaagaacatgttgtaccatagcgcccgcataaactgctta
gcttggtctccaaacagcactatggttgccacaggatccttggacacgtgtgtgattgtg
tatgaagtggacaaacctgcttcgtcacgcatgacaataaaaggagctcacttaggtgga
gtatatggtctgggttttgctgatgattcccatgtagtgagttctggtgaagatgcttgt
atccgcgtctggagctttactcctcaataa
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