Arabidopsis thaliana (thale cress): AT3G19760
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Entry
AT3G19760 CDS
T00041
Symbol
EIF4A-III
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath03013
Nucleocytoplasmic transport
ath03015
mRNA surveillance pathway
ath03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
AT3G19760 (EIF4A-III)
09122 Translation
03013 Nucleocytoplasmic transport
AT3G19760 (EIF4A-III)
03015 mRNA surveillance pathway
AT3G19760 (EIF4A-III)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ath03019
]
AT3G19760 (EIF4A-III)
03041 Spliceosome [BR:
ath03041
]
AT3G19760 (EIF4A-III)
03009 Ribosome biogenesis [BR:
ath03009
]
AT3G19760 (EIF4A-III)
03012 Translation factors [BR:
ath03012
]
AT3G19760 (EIF4A-III)
Enzymes [BR:
ath01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AT3G19760 (EIF4A-III)
Messenger RNA biogenesis [BR:
ath03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
AT3G19760 (EIF4A-III)
mRNA cycle factors
Stress granule specific factors
AT3G19760 (EIF4A-III)
Spliceosome [BR:
ath03041
]
Complex C
Other components
EJC/TREX
AT3G19760 (EIF4A-III)
Ribosome biogenesis [BR:
ath03009
]
Eukaryotic type
90S particles
Helicases
AT3G19760 (EIF4A-III)
Translation factors [BR:
ath03012
]
Eukaryotic type
Initiation factors
eIF-4
AT3G19760 (EIF4A-III)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_30
CMS1
AAA_22
Flavi_DEAD
Helicase_RecD
Motif
Other DBs
NCBI-GeneID:
821513
NCBI-ProteinID:
NP_188610
TAIR:
AT3G19760
UniProt:
Q94A52
A0A5S9XDT0
LinkDB
All DBs
Position
3:6863661..6866646
Genome browser
AA seq
408 aa
AA seq
DB search
MATANPGRGGGRRGGGAMDDDKLVFETTDGIEPITSFNDMGIKEDVLRGVYEYGFEKPSA
IQQRAVMPILQGRDVIAQAQSGTGKTSMIALSVCQVVDTSSREVQALILSPTRELATQTE
KTIQAIGLHANIQAHACIGGNSVGEDIRKLEHGVHVVSGTPGRVCDMIKRRSLRTRAIKL
LILDESDEMLSRGFKDQIYDVYRYLPPDLQVCLVSATLPHEILEMTSKFMTEPVKILVKR
DELTLEGIKQFFVAVEKEEWKFDTLCDLYDTLTITQAVIFCNTKRKVDYLSEKMRSHNFT
VSSMHGDMPQKERDAIMNEFRSGDSRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIH
RIGRSGRFGRKGVAINFVKSDDIKILRDIEQYYSTQIDEMPMNVADLI
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atggcgacagcgaatcctggccgtggaggtggtagaagaggcggtggagctatggatgac
gataagttggtcttcgagactaccgatggaattgagcccatcacgagcttcaatgatatg
ggcattaaggaagatgtgcttcgcggtgtctacgaatatggattcgagaagccttccgcg
attcagcagagggctgttatgccgattcttcaaggacgtgatgttattgctcaagctcag
tccggtaccgggaagacatctatgattgctctctccgtttgtcaagtcgttgatacttct
tctagagaggttcaggccttgatattatccccaacaagagagctggctacacaaacagag
aagacgatacaagctattggattacatgccaatattcaggcacatgcttgcatcggtggg
aatagtgttggagaagacatcaggaagctggagcatggtgttcatgttgtgtctgggaca
cctggtcgtgtctgtgacatgataaagaggagaagtcttcgtaccagagctattaaactt
ctgattcttgatgaatcagatgaaatgctgagcagagggttcaaggaccagatctatgat
gtttacagatatcttccaccagatcttcaggtttgcttggtttctgcaactcttcctcac
gagattttggagatgacatccaagtttatgacagaaccagtgaagatacttgtgaagcgt
gatgagttgactcttgaaggaatcaaacaattttttgttgctgttgagaaggaagagtgg
aaatttgatacactctgtgatctttatgacacgcttactatcactcaagctgttatcttc
tgcaatactaaacgaaaggtggattatcttagtgagaaaatgagaagtcacaacttcact
gtctcatcaatgcatggagacatgcctcagaaggagagagacgccatcatgaatgagttt
cggtcaggtgatagtcgtgttttgataacaacagatgtatgggcacgtgggattgatgtg
caacaagtttctcttgttatcaattatgatctccccaacaaccgtgagctctacatccat
cgtattgggcggtctggtcgattcgggcgtaagggtgttgcaatcaactttgttaaaagc
gacgacatcaagattctcagagacattgagcagtactacagtacccagattgatgagatg
ccaatgaatgtagctgatcttatctaa
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