Arabidopsis thaliana (thale cress): AT3G19870
Help
Entry
AT3G19870 CDS
T00041
Name
(RefSeq) AP-5 complex subunit beta-like protein
KO
K19022
AP-5 complex subunit beta-1
Organism
ath
Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ath03400
]
AT3G19870
DNA repair and recombination proteins [BR:
ath03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
AT3G19870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP5B1_middle
AP5B1_C
AP5B1_barrel
Motif
Other DBs
NCBI-GeneID:
821524
NCBI-ProteinID:
NP_001327307
TAIR:
AT3G19870
UniProt:
Q9LT22
A0A384KCP3
LinkDB
All DBs
Position
3:6907053..6911246
Genome browser
AA seq
1117 aa
AA seq
DB search
MTTTTPEKTPARPLSIQDWDVLIDDFRDAGAPRDWFTSVFQIDSLVDFALSSLLKKDFPT
PVKLSILVFLDEFSPILFDNCGSDTFDRFIDVLRTIVQSPTDGSSGLKEQAMVSFTSVLV
SIDSFSVGHVEAVVDLLLALVNRPNHGFDRQARAIACECLRQLEKAFPGLLSDVAGHLWS
LCQAERTHAVQAYLLLFTTIVYNVVNQKLKVSLLSTSVPLVPFNAPNWMRDESSIMSQGQ
GLGPDQKELRRTLAFMLESPYLFTSCAMMEFMGMVVPLASALELQASMLKVQFLGMIYSF
DPMLCHVVLLMYSRFPDAFEGQEKEIMRRLMLFSKETQIYLVFRLLALHWLMGLLNKHML
SGELEKRTSVLEMGQKFHPVVFDPLALKALKLDLLVQCSVSSNALSGGDNSKSAGDLLQD
CLVSVSDFKWLPPWSSETELAFRTLHKFLICASTHSDSDPSTTRILMESSLFQNVQGLLV
DMTLEFQILVPVIVAFIERLIHCHKHQWLGERFLQIVDENLLPKLKKKNLLTAYFPLFHR
IAENDTIPPSRLIELLTKFVISLVEKRGLDVGLKLWDQGTEVLGICRTLMSHHKSSRLFL
GLSRLLSLTCLYFPDLEVRDNARIYLRMLVCIPGQRIKNILKPADAVTPSTHSSTFFSVQ
SPRFRHDPSKSRNLSSYIHLERVTPLLVKQSWSLSLPSLSVGTDGYSIIENKIQVDEVEP
DGSQELQILPEARRIESGKPTLRVMDSKIAEILERLRRYFSVIPDFKHMPGIKVRITCTL
RLDAEPYSSIWGSETQKIDLEKVDSPPAIFATVLKFSSSAPYGSIPSCRIPFLLGEPHWN
SNVPNEEVSLDIVVVENTLKEEEKDGLRGAPVTVELEPREPTPGLVEVSMEANAENGQMI
QGKLESVPVGIEDMFLKALAPPDEPEDTIPSYYSDLFNALWEVCGSSSSTAHETFALKGG
KMAAAVSGTRSVKLLEVPAETVIQATELRLAPFVVAISGEQLVNIVRDGGIIENIVWKEE
EEEQGDHTNADQPSSSSVGLNRGPLRLTYIGYGDDQEVPMTRSRGKMGTIKMLMFLPPRY
HLMFEMEVGQGSTLVHIRTDYWPCLAYVDDYLEALFL
NT seq
3354 nt
NT seq
+upstream
nt +downstream
nt
atgaccacgacgacgccggagaagactccggcgagacctctctctatccaagattgggac
gttctcatcgacgacttccgcgacgccggcgctcctcgcgactggttcacttccgttttc
cagattgattctctggtggacttcgctctctcgtctctcctcaaaaaagacttccctaca
ccagtgaagctctcaatcctagtctttctcgatgaattttccccgattttgtttgataat
tgtggtagcgatacctttgatcgcttcatcgatgttctccggacgatcgtgcaatctcca
actgatggatcgtcaggattgaaagagcaagctatggtctctttcacgtctgtgcttgta
tcgattgattctttctctgtaggtcacgttgaagcagttgttgatttgcttcttgcgctc
gttaatcgtcctaaccacggatttgatcgacaagctcgtgctatcgcctgtgagtgttta
cgtcagcttgagaaagcttttcctggtttgttatctgatgtcgctggtcatctttggtcg
ttgtgtcaagcggagagaactcacgccgtgcaagcttatcttctcttgttcaccacaatt
gtctacaatgtggttaatcagaagcttaaggtttcacttcttagtacctctgtacctttg
gtgccttttaatgctcctaattggatgcgtgatgagagttcgattatgagtcaaggtcaa
gggttggggccagatcagaaggaactgagacgaacattggcttttatgttggaatctccg
tatttgtttacttcttgtgctatgatggaatttatgggtatggttgtgccacttgcatcg
gcgttggagttacaggcttctatgttgaaagttcagttcttggggatgatttattcgttt
gatccaatgctttgtcatgttgtcttgcttatgtattctcggttccctgatgcgtttgag
ggacaagagaaagagatcatgagacgtcttatgctcttttcaaaggagactcagatctat
cttgttttccgtttgcttgcgctgcactggttaatgggtttgttgaataagcatatgttg
agtggggagcttgagaagaggacatctgttcttgagatgggtcagaagtttcatcctgtc
gtttttgatccactcgctttgaaagcgttgaagcttgatctgctggtacaatgctctgtg
agttccaacgctttgagtggaggtgataacagtaaatctgctggggatttgttgcaggac
tgcttggtatcggtttcggatttcaaatggttgcctccatggagctcagaaactgaacta
gcattccgcactttacacaagtttctgatatgtgcatctacacattccgactctgaccct
tccaccactagaatccttatggagtctagcctcttccaaaacgtgcaggggttgctggta
gacatgactttggagtttcaaatcttggtccctgttattgtggcttttattgagcggttg
attcactgtcacaagcatcagtggttaggagagcggtttcttcagatagtcgatgagaat
ctgcttcccaaacttaagaaaaaaaacttattaacagcttacttcccgcttttccatcga
atagccgagaatgatacaatacctccttctcgattgatagagctgcttacgaagtttgta
atttcacttgttgagaagcgcggacttgatgtggggttgaaattgtgggatcaaggaact
gaagttcttggcatctgtcgaacattgatgagtcaccataagagctctagattatttctc
ggactctctcgccttctttccctcacatgtctctatttccctgatctggaggtccgagac
aatgctaggatatatctgaggatgctggtctgtataccaggacagagaattaagaacatt
ttgaagccggcagatgctgtcactccatcaacccattcttctacattttttagtgttcaa
agtcctcgttttcgtcatgatcctagtaaatctcggaacctttcatcctatattcatctt
gaacgggttacgcccctactcgtgaaacagtcatggtcattgtctctaccatctctaagt
gttggaactgatggatatagcattatagaaaacaaaatccaggtagatgaagttgagccg
gatggcagtcaagaacttcagattttgccagaagctcgaagaattgaatcaggaaaacct
acgttaagggtaatggactcaaagattgcagagattctagaaagattaagaagatatttc
tctgtgattcctgatttcaaacacatgccaggaattaaggttagaataacgtgtactttg
agattggatgctgaaccatatagcagtatatggggaagtgaaactcagaaaatcgattta
gagaaagtcgactcacctcctgcgattttcgcgacggtgctcaaattctcatcttcagcc
ccttatggctctattccctcatgtcgcatacctttccttctcggtgagcctcattggaac
agcaatgtacccaatgaagaagtttctttagacattgtcgtggtagaaaacacactgaaa
gaggaggaaaaagatggcttgagaggagcacctgtaacagtggaactggaacctagagaa
cctacaccaggtttggtcgaggtttcaatggaagcaaatgcagagaatggtcagatgatt
cagggaaaactcgagagtgtccctgtggggattgaagacatgttcctaaaagctcttgct
ccaccggacgaacctgaagatacaataccgagctactactcagatctattcaatgctttg
tgggaagtgtgtggttcttcgtccagcactgcacacgaaacatttgcactaaaaggtggc
aaaatggctgcagcagtcagcgggactcggtcagtaaaactgcttgaagtccctgcggaa
actgtaatacaggccactgagcttcgtttagcgccctttgtggtggctatcagtggagaa
cagcttgtaaacattgtaagagacggaggaattattgagaacattgtgtggaaggaagag
gaagaagaacaaggggatcacacaaatgcggaccagccttcttcatcctcggtgggatta
aaccgaggccctcttcgtctgacatacattggatatggagatgaccaagaggttccgatg
acgagaagtagggggaaaatgggaacgataaagatgctgatgtttctgccgccaagatat
catctaatgtttgaaatggaagttgggcaaggatcgacattggtgcatataagaacagat
tattggccttgcttagcttatgttgatgattacttagaagctttgtttttgtaa
DBGET
integrated database retrieval system
