Arabidopsis thaliana (thale cress): AT3G19950
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Entry
AT3G19950 CDS
T00041
Name
(RefSeq) RING/U-box superfamily protein
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
ath
Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ath04131
]
AT3G19950
04121 Ubiquitin system [BR:
ath04121
]
AT3G19950
Enzymes [BR:
ath01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
AT3G19950
Membrane trafficking [BR:
ath04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
AT3G19950
Ubiquitin system [BR:
ath04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
AT3G19950
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-C3HC4_2
zf-RING_11
zf-rbx1
zf-C3HC4
zf-C3HC4_3
zf-RING_UBOX
zf-RING_5
Prok-RING_1
zf-ANAPC11
zf-RING_16
zf-RING_Vps41
FAR1_N
zf-RING_4
zf-RING_10
U-box_ZFPL1
Zf_IFT144_1st
VPS18_RING_C
zf-HC5HC2H
Motif
Other DBs
NCBI-GeneID:
821533
NCBI-ProteinID:
NP_188629
TAIR:
AT3G19950
UniProt:
Q8LPN7
LinkDB
All DBs
Position
3:6942623..6945224
Genome browser
AA seq
328 aa
AA seq
DB search
MSSGVNSTGSAAAAPEVDKMFFCYQCNQTVTISISSSADPFCPICNQGFLEEYEDPNPNQ
SLNFNPNSSDSFFPMADPFSTLLPLIFGSSAAAPSGMDFMSLFGPSMQPQARSTQQNPQS
DAFDPFTFLQNHLQTLRSSGTHFEFVIENHPSDPGNRMPGNFGDYFFGPGLEQLIQQLAE
NDPNRYGTPPASKSAIDALPTVKVTKDMLKSEMNQCAVCMDEFEDGSDVKQMPCKHVFHQ
DCLLPWLELHNSCPVCRFELPTDDPDYENRSQGSQGSGDGQGSVEGQQTPRFSIQLPWPF
RRQDGSGSGSGAPGTGGGNLETRGEDLD
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccggcgtaaattcaactggctccgccgcagcagcaccggaggttgacaagatg
ttcttctgctaccagtgcaatcaaacagtcacaatctcaatttcctcatccgctgatcct
ttttgtccaatttgtaaccaagggtttcttgaagaatacgaagaccctaaccctaatcaa
tccctcaatttcaaccctaactcttctgattcctttttccccatggccgatcctttctcc
accttgctcccgctcatattcggctcttccgctgccgctccttccggcatggacttcatg
agcttattcggtccttcgatgcaaccacaggctcgttccactcagcagaatcctcagtct
gacgcgtttgatccgtttacgtttcttcagaatcatctccagactttgcgatctagcggt
acgcactttgagttcgtgatcgagaatcatccttcggatccaggtaatcgtatgcctggg
aatttcggtgattacttctttggtccaggtcttgagcagttgattcagcaactagctgag
aatgatcctaatcgttacggaactcctcctgcttccaaatccgccattgatgctcttcct
actgttaaggtaacgaaggatatgttgaaatcggagatgaaccaatgcgcggtgtgtatg
gatgagtttgaggatggtagcgatgttaagcagatgccttgtaagcacgtctttcatcag
gactgtttgctcccttggctggagttgcataattcgtgtcctgtttgtcgattcgagttg
cctacggatgatcctgattatgagaacaggagtcaaggaagtcaggggagtggtgatgga
caaggatcggttgagggtcagcagacgccgaggtttagtatacaacttccttggccgttc
aggagacaagatggctctggttcaggctcgggagcacctggtactggtggaggtaatctt
gagaccaggggtgaagatttggattga
DBGET
integrated database retrieval system
